WormBase Tree Display for Gene: WBGene00155474

WBGene00155474 SMap: S_parent: Sequence: Cbre_Contig110
  Identity: Version: 1
    Name: CGC_name: Cbn-unc-108 From_analysis: Inferred_from_orthology
      Sequence_name: CBN16749
      Molecular_name: CBN16749
        CBN16749.1
        CN22829
      Other_name: CBN16749
      Public_name: Cbn-unc-108
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-unc-108
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 131.603 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        65.8015 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 109.835 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        137.346 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        220.586 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        228.796 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        243.826 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 148.641 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        148.721 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        148.802 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 64.4981 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        70.9913 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00215669
      00215670
    Ortholog: WBGene00006833 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
      WBGene00033026 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062307 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00113195 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g9307 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g565 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4287 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6907 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1878 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g20433 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g333 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9840 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16455 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00042.g2304 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-108 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_08188 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002190 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05523 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13928 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10164210 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00224578 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g581 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237917 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261323 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00294642 Trichuris muris From_analysis: WormBase-Compara
    Paralog (42)
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans unc-108. In C. elegans, unc-108 is involved in several processes, including dense core granule maturation; phagosome maturation involved in apoptotic cell clearance; and regulation of locomotion involved in locomotory behavior. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN16749
    Corresponding_transcript: CBN16749.1
    Other_sequence (30)
  Experimental_info: Microarray_results: GPL14142_CBN16749_297-356_0.895_16_C
      GPL14142_CBN16749_458-517_0.931_7_B
      GPL14142_CBN16749_548-607_0.975_1_A
  Method: Gene