WormBase Tree Display for Gene: WBGene00155474

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WBGene00155474	SMap	S_parent	Sequence	Cbre_Contig110
	Identity	Version	1
		Name	CGC_name	Cbn-unc-108	From_analysis	Inferred_from_orthology
			Sequence_name	CBN16749
			Molecular_name	CBN16749
				CBN16749.1
				CN22829
			Other_name	CBN16749
			Public_name	Cbn-unc-108
		Species	Caenorhabditis brenneri
		History	Version_change	1	30 Oct 2008 10:39:28	WBPerson4055	Event	Imported	from NGASP
							Name_change	CGC_name	Cbn-unc-108
		Status	Live
	Gene_info	Biotype	SO:0001217
		Gene_class	unc
		RNASeq_FPKM	WBls:0000002	0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
						RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
				41.1356	From_analysis	RNASeq.brenneri.WBls:0000002.control_mean
				42.1857	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
				42.5119	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
				45.3318	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
				45.7355	From_analysis	RNASeq.brenneri.WBls:0000002.control_median
				46.1392	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
				48.4859	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
				52.4943	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
				66.4671	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
				67.7402	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
			WBls:0000004	131.603	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
				65.8015	From_analysis	RNASeq.brenneri.WBls:0000004.control_mean
						RNASeq.brenneri.WBls:0000004.control_median
			WBls:0000024	109.835	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
				137.346	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
				220.586	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
				228.796	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
				243.826	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
			WBls:0000038	148.641	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
				148.721	From_analysis	RNASeq.brenneri.WBls:0000038.control_mean
						RNASeq.brenneri.WBls:0000038.control_median
				148.802	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
			WBls:0000041	111.143	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
				112.732	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
				123.791	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
				123	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
				153.281	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
				169.07	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
				0	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
						RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
				52.2276	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
				57.156	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
				62.5814	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
				64.4981	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
				77.9585	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
				78.2628	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
				81.7531	From_analysis	RNASeq.brenneri.WBls:0000041.control_median
				85.0204	From_analysis	RNASeq.brenneri.WBls:0000041.control_mean
				85.2433	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
				89.3825	From_analysis	RNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
			WBls:0000101	64.4981	From_analysis	RNASeq.brenneri.total_over_all_stages.control_median
				70.9913	From_analysis	RNASeq.brenneri.total_over_all_stages.control_mean
		GO_annotation	00215669
			00215670
		Ortholog	WBGene00006833	Caenorhabditis elegans	From_analysis	OMA
						Inparanoid_8
			WBGene00033026	Caenorhabditis briggsae	From_analysis	OMA
						Inparanoid_8
						WormBase-Compara
			WBGene00062307	Caenorhabditis remanei	From_analysis	OMA
						TreeFam
						Inparanoid_8
						WormBase-Compara
			WBGene00113195	Pristionchus pacificus	From_analysis	OMA
						Inparanoid_8
						WormBase-Compara
			CBOVI.g9307	Caenorhabditis bovis	From_analysis	WormBase-Compara
			CSP21.g565	Caenorhabditis parvicauda	From_analysis	WormBase-Compara
			CSP26.g4287	Caenorhabditis zanzibari	From_analysis	WormBase-Compara
			CSP28.g6907	Caenorhabditis panamensis	From_analysis	WormBase-Compara
			CSP29.g1878	Caenorhabditis becei	From_analysis	WormBase-Compara
			CSP31.g20433	Caenorhabditis uteleia	From_analysis	WormBase-Compara
			CSP38.g333	Caenorhabditis quiockensis	From_analysis	WormBase-Compara
			CSP39.g9840	Caenorhabditis waitukubuli	From_analysis	WormBase-Compara
			CSP40.g16455	Caenorhabditis tribulationis	From_analysis	WormBase-Compara
			Cang_2012_03_13_00042.g2304	Caenorhabditis angaria	From_analysis	WormBase-Compara
			Cni-unc-108	Caenorhabditis nigoni	From_analysis	WormBase-Compara
			FL83_08188	Caenorhabditis latens	From_analysis	WormBase-Compara
			GCK72_002190	Caenorhabditis remanei	From_analysis	WormBase-Compara
			OTIPU.nOt.2.0.1.g05523	Oscheius tipulae	From_analysis	WormBase-Compara
			Pan_g13928	Panagrellus redivivus	From_analysis	WormBase-Compara
			Sp34_10164210	Caenorhabditis inopinata	From_analysis	WormBase-Compara
			WBGene00224578	Brugia malayi	From_analysis	WormBase-Compara
			chrI_pilon.g581	Caenorhabditis elegans	From_analysis	WormBase-Compara
			WBGene00237917	Onchocerca volvulus	From_analysis	WormBase-Compara
			WBGene00261323	Strongyloides ratti	From_analysis	WormBase-Compara
			WBGene00294642	Trichuris muris	From_analysis	WormBase-Compara
		Paralog	WBGene00143635	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00143888	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00160355	Caenorhabditis brenneri	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00142155	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00142282	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00142962	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00143357	Caenorhabditis brenneri	From_analysis	WormBase-Compara
			WBGene00144255	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00144996	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00145182	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00145417	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00145637	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00145807	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00147927	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00147970	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00148196	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00151653	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00151668	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00151948	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00153443	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00154042	Caenorhabditis brenneri	From_analysis	WormBase-Compara
			WBGene00155241	Caenorhabditis brenneri	From_analysis	WormBase-Compara
			WBGene00157525	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00157945	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00158546	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00158802	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00158892	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00159337	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00162004	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00162845	Caenorhabditis brenneri	From_analysis	WormBase-Compara
			WBGene00163158	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00164547	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00164630	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00190038	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00190077	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00190569	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00190978	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00191339	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00191363	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00192821	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00194636	Caenorhabditis brenneri	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00140637	Caenorhabditis brenneri	From_analysis	GeneACeDB-Compara
		Structured_description	Automated_description	Predicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans unc-108. In C. elegans, unc-108 is involved in several processes, including dense core granule maturation; phagosome maturation involved in apoptotic cell clearance; and regulation of locomotion involved in locomotory behavior.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CBN16749
		Corresponding_transcript	CBN16749.1
		Other_sequence	CBC03575_1
			FG618950.1
			SS01373
			Dviv_isotig23404
			CR02216
			Y11881.2
			FC811087.1
			PPC05439_1
			SRC00876_1
			SSC00790_1
			CGC00341_1
			FG349449.1
			HG12162
			CSC00153_1
			CRC03323_1
			Acan_isotig12781
			XI03685
			JI212779.1
			PT01384
			CJC03774_1
			PTC00845_1
			FD514392.1
			Name_isotig01070
			CGC00210_1
			EX553648.1
			SR00402
			BU665961.1
			FC816561.1
			NB06618
			NBC00207_1
	Experimental_info	Microarray_results	GPL14142_CBN16749_297-356_0.895_16_C
			GPL14142_CBN16749_458-517_0.931_7_B
			GPL14142_CBN16749_548-607_0.975_1_A
	Method	Gene