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WormBase Tree Display for Gene: WBGene00149616

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Name Class

WBGene00149616SMapS_parentSequenceCbre_Contig9
IdentityVersion5
NameCGC_nameCbn-sma-9From_analysisInferred_from_orthology
Sequence_nameCBN10891
Molecular_nameCBN10891
CBN10891.1
CN37733
Public_nameCbn-sma-9
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
227 Jan 2010 11:48:23WBPerson615EventAcquires_mergeWBGene00145571
327 Jan 2010 11:48:23WBPerson615EventAcquires_mergeWBGene00190672
427 Jan 2010 11:48:23WBPerson615EventAcquires_mergeWBGene00142748
520 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCbn-sma-9
Acquires_mergeWBGene00142748
WBGene00145571
WBGene00190672
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsma
RNASeq_FPKMWBls:0000002 (11)
WBls:000000416.3238From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
8.1619From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
21.792From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
25.8541From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
38.9001From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
40.3556From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
41.6136From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
WBls:00000389.35532From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
9.40012From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
9.44491From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
WBls:0000041 (17)
WBls:00001014.18149From_analysisRNASeq.brenneri.total_over_all_stages.control_median
4.81706From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (30)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Is an ortholog of C. elegans sma-9. In C. elegans, sma-9 is involved in several processes, including determination of adult lifespan; nematode male tail tip morphogenesis; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN10891
Corresponding_CDS_historyCBN10891:np197
CBN10891:np211
Corresponding_transcriptCBN10891.1
Other_sequence (84)
Experimental_infoMicroarray_resultsGPL14142_CBN04023_1067-1126_0.932_1_A
GPL14142_CBN06846_1001-1060_0.960_1_A
GPL14142_CBN10891_3537-3596_0.945_1_A
GPL14142_CBN10891_3547-3606_0.943_2_B
GPL14142_CBN10891_3551-3610_0.941_3_C
GPL14142_CBN28707_123-182_0.944_1_A
MethodGene