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WormBase Tree Display for Gene: WBGene00146306

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Name Class

WBGene00146306SMapS_parentSequenceCbre_Contig333
IdentityVersion1
NameCGC_nameCbn-ocrl-1From_analysisInferred_from_orthology
Sequence_nameCBN07581
Molecular_nameCBN07581
CBN07581.1
CN19392
Other_nameCBN07581
Public_nameCbn-ocrl-1
SpeciesCaenorhabditis brenneri
HistoryVersion_change130 Oct 2008 10:39:28WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCbn-ocrl-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classocrl
RNASeq_FPKMWBls:0000002 (11)
WBls:00000041.48211From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
2.96422From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:000002410.4658From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
6.66198From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
8.43456From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
9.05187From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
9.34579From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
WBls:00000386.07025From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
6.58513From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
7.10002From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (17)
WBls:00001014.1988From_analysisRNASeq.brenneri.total_over_all_stages.control_median
5.19535From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
GO_annotation00208292
00208293
00208294
00208295
Ortholog (32)
ParalogWBGene00158191Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00190809Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00143984Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00151376Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154815Caenorhabditis brenneriFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00156885Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00162968Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192008Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193868Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation and signal transduction. Is an ortholog of C. elegans ocrl-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN07581
Corresponding_transcriptCBN07581.1
Other_sequence (12)
Experimental_infoMicroarray_resultsGPL14142_CBN07581_1018-1077_0.727_188_A
MethodGene