WormBase Tree Display for Gene: WBGene00144273

WBGene00144273 SMap: S_parent: Sequence: Cbre_Contig13
  Identity: Version: 1
    Name: CGC_name: Cbn-unc-49 From_analysis: Inferred_from_orthology
      Sequence_name: CBN05548
      Molecular_name: CBN05548
        CBN05548.1
        CN16632
      Other_name: CBN05548
      Public_name: Cbn-unc-49
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-unc-49
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 0.275167 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        0.550334 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
      WBls:0000024 16.1029 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        19.6563 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        19.788 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        21.012 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        22.3909 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 11.8182 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        12.4201 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        13.022 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 3.8516 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        4.75235 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00206734
      00206735
      00206736
      00206737
      00206738
      00206739
    Ortholog: WBGene00006784 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00008551 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00013914 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00037805 Caenorhabditis briggsae From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00055316 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00055771 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00081417 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00119924 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00129121 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00130247 Caenorhabditis japonica From_analysis: TreeFam
      CBOVI.g4076 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2958 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4857 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9434 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15298 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14166 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2620 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13596 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g4329 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g436 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_12910.g23984 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_III.g9603 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold628.g7353 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00128.g5094 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_11418 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010455 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30124910 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00113693 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00226150 Brugia malayi From_analysis: WormBase-Compara
      chrIII_pilon.g8886 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00211001 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00244711 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263154 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287048 Trichuris muris From_analysis: WormBase-Compara
    Paralog (128)
    Structured_description: Automated_description: Predicted to enable extracellular ligand-gated monoatomic ion channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans unc-49. In C. elegans, unc-49 is involved in gamma-aminobutyric acid signaling pathway; locomotory behavior; and regulation of backward locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN05548
    Corresponding_transcript: CBN05548.1
    Other_sequence (50)
  Experimental_info: Microarray_results: GPL14142_CBN05548_1516-1575_0.726_142_C
      GPL14142_CBN05548_2003-2062_0.793_73_B
      GPL14142_CBN05548_2266-2325_0.891_18_A
  Method: Gene