WormBase Tree Display for Gene: WBGene00136008

WBGene00136008 SMap: S_parent: Sequence: Cjap.Contig18178
  Identity: Version: 2
    Name: CGC_name: Cjp-unc-30 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16804
      Molecular_name: CJA16804
        CJA16804.1
        JA07359
      Public_name: Cjp-unc-30
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-unc-30
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 17.4883 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 9.1097 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 3.86361 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        4.70263 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        5.54166 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 0.495968 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        0.67507 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        0.686845 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        0.759185 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        0.819524 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        0.879862 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        1.00639 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        1.45256 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        1.48116 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        1.62044 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
      WBls:0000101 1.45256 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        3.3888 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00200034
      00200035
    Ortholog: WBGene00006766 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00025006 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062733 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222115 Brugia malayi From_analysis: WormBase-Compara
      WBGene00231184 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8957 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2906 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15240 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13827 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6959 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2585 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14409 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g8628 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP40.g2365 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01031.g15429 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-30 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10922 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00041.g2203 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19439 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014504 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g17942 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40144600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12228 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00241889 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00267688 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287313 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298058 Trichuris muris From_analysis: WormBase-Compara
    Paralog (18)
    Structured_description: Automated_description: Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Is an ortholog of C. elegans unc-30. In C. elegans, unc-30 is involved in neuron differentiation; positive regulation of transcription by RNA polymerase II; and regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16804
    Corresponding_transcript: CJA16804.1
    Other_sequence: CBC05195_1
      BMC12182_1
      Acan_isotig10301
      JI173604.1
      Dviv_isotig23393
      CJC03266_1
      Oden_isotig21606
      BMC01965_1
  Experimental_info: Expr_pattern: Expr1087822
    Microarray_results: GPL14145_CJA16804_492-551_0.911_4_B
      GPL14145_CJA16804_684-743_0.924_2_C
      GPL14145_CJA16804_863-922_0.909_5_A
  Method: Gene