WormBase Tree Display for Gene: WBGene00135250

WBGene00135250 SMap: S_parent: Sequence: Cjap.Contig17943
  Identity: Version: 3
    Name: CGC_name: Cjp-ife-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA16046
      Molecular_name: CJA16046
        CJA16046.1
        JA53075
      Public_name: Cjp-ife-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:23 WBPerson4055 Event: Imported: NGASP import
        2 29 Jul 2011 11:13:38 WBPerson4055 Event: Imported: Augustus import
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cjp-ife-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ife
    RNASeq_FPKM: WBls:0000004 296.697 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 230.755 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 176.592 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        190.846 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        205.101 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 360.214 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        377.719 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        396.098 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        419.733 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        425.533 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        431.332 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        442.691 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        512.339 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        519.441 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        524.651 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 342.359 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        377.719 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00199444
      00199445
      00199446
    Ortholog (32)
    Paralog: WBGene00135123 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00138066 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00130138 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00213710 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00217215 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity and translation initiation factor activity. Predicted to be involved in translational initiation. Is an ortholog of C. elegans ife-1. In C. elegans, ife-1 is involved in embryo development; oocyte maturation; and spermatid development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA16046
    Corresponding_transcript: CJA16046.1
    Other_sequence (33)
  Experimental_info: Expr_pattern: Expr1090417
    Microarray_results: GPL14145_CJA16046_258-317_0.818_35_C
      GPL14145_CJA16046_373-432_0.950_2_A
      GPL14145_CJA16046_530-589_0.828_33_B
  Method: Gene