WormBase Tree Display for Gene: WBGene00134996
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WBGene00134996 | SMap | S_parent | Sequence | Cjap.Contig17566 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Cjp-unc-4 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | CJA15792 | ||||||||
Molecular_name | CJA15792a | ||||||||
CJA15792a.1 | |||||||||
JA65977 | |||||||||
CJA15792b | |||||||||
JA59371 | |||||||||
CJA15792c | |||||||||
JA58157 | |||||||||
CJA15792b.1 | |||||||||
CJA15792c.1 | |||||||||
Public_name | Cjp-unc-4 | ||||||||
Species | Caenorhabditis japonica | ||||||||
History | Version_change | 1 | 29 Aug 2008 14:34:23 | WBPerson4055 | Event | Imported | from NGASP | ||
Name_change | CGC_name | Cjp-unc-4 | |||||||
2 | 29 Jul 2011 11:13:38 | WBPerson4055 | Event | Imported | Augustus import | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Cjp-unc-4 | ||||
5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Cjp-unc-4 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000004 | 1.99292 | From_analysis (3) | ||||||
WBls:0000027 | 0.424633 | From_analysis (3) | |||||||
WBls:0000038 | 0 | From_analysis (4) | |||||||
WBls:0000041 | 0.243054 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960 | ||||||
0.27287 | From_analysis | RNASeq.japonica.WBls:0000041.control_mean | |||||||
0.281926 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961 | |||||||
0.28267 | From_analysis | RNASeq.japonica.WBls:0000041.control_median | |||||||
0.283415 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964 | |||||||
0.299061 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963 | |||||||
0.413344 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959 | |||||||
0.662158 | From_analysis | RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962 | |||||||
0 | From_analysis (2) | ||||||||
WBls:0000101 | 0.281926 | From_analysis | RNASeq.japonica.total_over_all_stages.control_median | ||||||
0.353886 | From_analysis | RNASeq.japonica.total_over_all_stages.control_mean | |||||||
GO_annotation | 00199246 | ||||||||
Ortholog (32) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA binding activity. Is an ortholog of C. elegans unc-4. In C. elegans, unc-4 is involved in several processes, including negative regulation of transcription by RNA polymerase II; nervous system development; and synaptic vesicle transport. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | CJA15792a | |||||||
CJA15792b | |||||||||
CJA15792c | |||||||||
Corresponding_transcript | CJA15792a.1 | ||||||||
CJA15792b.1 | |||||||||
CJA15792c.1 | |||||||||
Other_sequence | Oden_isotig24826 | ||||||||
Acan_isotig12060 | |||||||||
Hbac_isotig06627 | |||||||||
Dviv_isotig25636 | |||||||||
JI228715.1 | |||||||||
Experimental_info | Expr_pattern | Expr1083561 | |||||||
Expr1086901 | |||||||||
Microarray_results | GPL14145_CJA15792_309-368_0.675_30_C | ||||||||
GPL14145_CJA15792_390-449_0.842_7_A | |||||||||
GPL14145_CJA15792_92-151_0.638_33_B | |||||||||
GPL14145_CJA24631_19-78_0.923_2_A | |||||||||
Remark | [190208 pad] The CGC name Cjp-unc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Cjp-unc-4 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |