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WormBase Tree Display for Gene: WBGene00134996

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Name Class

WBGene00134996SMapS_parentSequenceCjap.Contig17566
IdentityVersion6
NameCGC_nameCjp-unc-4From_analysisInferred_from_orthology
Sequence_nameCJA15792
Molecular_nameCJA15792a
CJA15792a.1
JA65977
CJA15792b
JA59371
CJA15792c
JA58157
CJA15792b.1
CJA15792c.1
Public_nameCjp-unc-4
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-4
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameCjp-unc-4
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCjp-unc-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000041.99292From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:00000270.424633From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000380From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000410.243054From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
0.27287From_analysisRNASeq.japonica.WBls:0000041.control_mean
0.281926From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
0.28267From_analysisRNASeq.japonica.WBls:0000041.control_median
0.283415From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
0.299061From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
0.413344From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
0.662158From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
0From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001010.281926From_analysisRNASeq.japonica.total_over_all_stages.control_median
0.353886From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00199246
OrthologWBGene00000433Caenorhabditis elegansFrom_analysisTreeFam
WBGene00006744Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00020485Caenorhabditis elegansFrom_analysisTreeFam
WBGene00024297Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00067190Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00110912Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00162744Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00223870Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12774Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10535Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5091Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g7676Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g8979Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27016Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g11615Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g11412Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7820Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2298Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00347.g9545Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-4Caenorhabditis nigoniFrom_analysisWormBase-Compara
FL83_04706Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_004835Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08609Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13958Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g5402Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20171000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5621Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248105Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266621Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285201Trichuris murisFrom_analysisWormBase-Compara
WBGene00285520Trichuris murisFrom_analysisWormBase-Compara
WBGene00297273Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00125561Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00131006Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00120087Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00121589Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00122914Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00124871Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125992Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130262Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130940Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00130992Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132738Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00133075Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00135228Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136008Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00136091Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00207922Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00208549Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00213500Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA binding activity. Is an ortholog of C. elegans unc-4. In C. elegans, unc-4 is involved in several processes, including negative regulation of transcription by RNA polymerase II; nervous system development; and synaptic vesicle transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA15792a
CJA15792b
CJA15792c
Corresponding_transcriptCJA15792a.1
CJA15792b.1
CJA15792c.1
Other_sequenceOden_isotig24826
Acan_isotig12060
Hbac_isotig06627
Dviv_isotig25636
JI228715.1
Experimental_infoExpr_patternExpr1083561
Expr1086901
Microarray_resultsGPL14145_CJA15792_309-368_0.675_30_C
GPL14145_CJA15792_390-449_0.842_7_A
GPL14145_CJA15792_92-151_0.638_33_B
GPL14145_CJA24631_19-78_0.923_2_A
Remark[190208 pad] The CGC name Cjp-unc-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cjp-unc-4 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene