WormBase Tree Display for Gene: WBGene00129458

WBGene00129458 SMap: S_parent: Sequence: Cjap.Contig16436
  Identity: Version: 2
    Name: CGC_name: Cjp-pdl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA10254
      Molecular_name: CJA10254
        CJA10254.1
        JA16874
      Public_name: Cjp-pdl-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:22 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-pdl-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pdl
    RNASeq_FPKM: WBls:0000004 29.0798 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 41.7481 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 26.401 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        26.5903 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        26.7797 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 1.999 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        2.1193 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        2.60929 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        2.72688 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        3.7249 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        4.347 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        4.72292 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        6.33619 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        6.97292 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        7.28954 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
      WBls:0000101 12.2142 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        6.33619 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00194828
    Ortholog (32)
    Paralog: WBGene00124459 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00213697 Caenorhabditis japonica From_analysis: TreeFam
    Structured_description: Automated_description: Predicted to be involved in sensory perception of light stimulus. Is an ortholog of C. elegans pdl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA10254
    Corresponding_transcript: CJA10254.1
    Other_sequence (16)
  Experimental_info: Expr_pattern: Expr1080883
    Microarray_results: GPL14145_CJA10254_171-230_0.918_4_A
      GPL14145_CJA10254_21-80_0.887_20_B
      GPL14145_CJA10254_85-144_0.923_2_C
  Method: Gene