WormBase Tree Display for Gene: WBGene00127275

WBGene00127275 SMap: S_parent: Sequence: Cjap.Contig17646
  Identity: Version: 2
    Name: CGC_name: Cjp-lip-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA08071
      Molecular_name: CJA08071
        CJA08071.1
        JA39537
      Public_name: Cjp-lip-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lip-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lip
    RNASeq_FPKM: WBls:0000004 20.0739 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 24.3849 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 14.5328 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        16.9187 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        19.3046 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.4537 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        18.7428 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        18.7559 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        27.0319 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        28.8431 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        29.4891 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        29.5277 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        7.17681 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        8.73349 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        8.79166 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
      WBls:0000101 17.5649 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        19.3046 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    GO_annotation: 00193048
      00193049
      00193050
      00193051
    Ortholog (30)
    Paralog: WBGene00122460 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00125113 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127670 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128176 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133941 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134691 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135512 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135860 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00206626 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214677 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans lip-1. In C. elegans, lip-1 is involved in several processes, including negative regulation of Ras protein signal transduction; positive regulation of vulval development; and vulval cell fate specification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA08071
    Corresponding_transcript: CJA08071.1
    Other_sequence (26)
  Experimental_info: Expr_pattern: Expr1078813
    Microarray_results: GPL14145_CJA08071_541-600_0.907_7_C
      GPL14145_CJA08071_782-841_0.891_11_B
      GPL14145_CJA08071_935-994_0.938_3_A
  Method: Gene