WormBase Tree Display for Gene: WBGene00122460

WBGene00122460 SMap: S_parent: Sequence: Cjap.Contig17566
  Identity: Version: 2
    Name: CGC_name: Cjp-vhp-1 From_analysis: Inferred_from_orthology
      Sequence_name: CJA03256
      Molecular_name: CJA03256
        CJA03256.1
        JA08919
      Public_name: Cjp-vhp-1
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:20 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-vhp-1
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vhp
    RNASeq_FPKM: WBls:0000004 137.813 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 132.207 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 56.9166 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        58.6446 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        60.3725 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 36.2529 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        36.9032 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        39.2163 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        42.2371 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        43.0667 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        43.8962 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        47.9114 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
        60.9199 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        61.4758 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        62.3898 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
      WBls:0000101 56.9166 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
        59.277 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
    GO_annotation: 00189227
      00189228
      00189229
      00189230
    Ortholog (33)
    Paralog: WBGene00127275 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00125113 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00127670 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00128176 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00133941 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00134691 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135512 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00135860 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00206626 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00214677 Caenorhabditis japonica From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans vhp-1. In C. elegans, vhp-1 is involved in several processes, including regulation of cellular response to stress; regulation of defense response to bacterium; and regulation of protein localization to nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA03256
    Corresponding_transcript: CJA03256.1
    Other_sequence (29)
  Experimental_info: Expr_pattern: Expr1079329
    Microarray_results: GPL14145_CJA03256_1326-1385_0.587_217_B
      GPL14145_CJA03256_1406-1465_0.778_61_A
      GPL14145_CJA03256_808-867_0.827_32_C
  Method: Gene