WormBase Tree Display for Gene: WBGene00125390

WBGene00125390 SMap: S_parent: Sequence: Cjap.Contig18184
  Identity: Version: 2
    Name: CGC_name: Cjp-lpr-3 From_analysis: Inferred_from_orthology
      Sequence_name: CJA06186
      Molecular_name: CJA06186
        CJA06186.1
        JA65405
      Public_name: Cjp-lpr-3
    Species: Caenorhabditis japonica
    History: Version_change: 1 29 Aug 2008 14:34:21 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cjp-lpr-3
        2 29 Jul 2011 11:13:37 WBPerson4055 Event: Imported: Augustus import
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lpr
    RNASeq_FPKM: WBls:0000004 339.876 From_analysis: RNASeq.japonica.WBls:0000004.control_mean
            RNASeq.japonica.WBls:0000004.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
      WBls:0000027 327.525 From_analysis: RNASeq.japonica.WBls:0000027.control_mean
            RNASeq.japonica.WBls:0000027.control_median
            RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
      WBls:0000038 356.506 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
        358.357 From_analysis: RNASeq.japonica.WBls:0000038.control_mean
            RNASeq.japonica.WBls:0000038.control_median
        360.207 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
      WBls:0000041 10.5099 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
        12.3955 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
        13.0491 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
        13.9054 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
        3.00468 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
        4.37086 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
        6.60488 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
        6.87126 From_analysis: RNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
        8.69058 From_analysis: RNASeq.japonica.WBls:0000041.control_median
        8.83895 From_analysis: RNASeq.japonica.WBls:0000041.control_mean
      WBls:0000101 111.91 From_analysis: RNASeq.japonica.total_over_all_stages.control_mean
        12.3955 From_analysis: RNASeq.japonica.total_over_all_stages.control_median
    Ortholog (28)
    Paralog: WBGene00120691 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00123546 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00135185 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domain: Calycin. Is an ortholog of C. elegans lpr-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CJA06186
    Corresponding_transcript: CJA06186.1
    Other_sequence (51)
  Experimental_info: Expr_pattern: Expr1071425
    Microarray_results: GPL14145_CJA06186_1164-1223_0.945_3_C
      GPL14145_CJA06186_1272-1331_0.952_1_B
      GPL14145_CJA06186_1430-1489_0.815_66_A
  Method: Gene