WormBase Tree Display for Gene: WBGene00113122
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WBGene00113122 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Identity | Version | 11 | ||||
Name | CGC_name | Ppa-unc-6 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA23568 | |||||
Molecular_name | PPA23568 | |||||
PPA23568.1 | ||||||
PP57265 | ||||||
Other_name | GENEPREDICTION_SNAP300000080463 | |||||
GENEPREDICTION_SNAP300000080464 | ||||||
GENEPREDICTION_SNAP300000080465 | ||||||
UMA-S344-3.38 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-unc-6 | |||||
Species | Pristionchus pacificus | |||||
History | Version_change (11) | |||||
Acquires_merge | WBGene00113123 | |||||
WBGene00113124 | ||||||
WBGene00203257 | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
RNASeq_FPKM | WBls:0000032 | 1.21582 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0.883883 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
1.21582 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
1.43583 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
Ortholog (32) | ||||||
Paralog (6) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: WW domain; Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin-type EGF domain; Tissue inhibitor of metalloproteinases-like, OB-fold; Netrin module, non-TIMP type; Laminin EGF domain; Laminin N-terminal (Domain VI); and WW domain superfamily. Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA23568 | ||||
Corresponding_transcript | PPA23568.1 | |||||
Other_sequence | MIC02438_1 | |||||
EY466445.1 | ||||||
FC815460.1 | ||||||
ACC17601_1 | ||||||
SR01905 | ||||||
JI170154.1 | ||||||
SRC02207_1 | ||||||
MI02920 | ||||||
FC810088.1 | ||||||
Acan_isotig10408 | ||||||
EY460685.1 | ||||||
CRC02888_1 | ||||||
FC553194.1 | ||||||
BXC06240_1 | ||||||
FC550368.1 | ||||||
CR06517 | ||||||
Dviv_isotig24727 | ||||||
BE217664.1 | ||||||
Experimental_info | Microarray_results (12) | |||||
Expression_cluster | WBPaper00041207:PP_dauer_down | |||||
Remark | [190208 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[200204 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
[210528 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |