WormBase Tree Display for Gene: WBGene00112287
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| WBGene00112287 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-dph-5.1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA22733 | ||||||||
| Molecular_name | PPA22733 | ||||||||
| PPA22733.1 | |||||||||
| PP22231 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000079474 | ||||||||
| GENEPREDICTION_SNAP300000079476 | |||||||||
| UMM-S10-93.13 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-dph-5.1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00112289 | ||||
| 3 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 4 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-dph-5.1 | ||||
| Acquires_merge | WBGene00112289 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dph | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00183616 | ||||||||
| 00183617 | |||||||||
| 00183618 | |||||||||
| 00183619 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable alpha-1,4-mannosyltransferase activity and glycolipid mannosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in membrane. Is an ortholog of C. elegans dph-5. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA22733 | |||||||
| Corresponding_CDS_history | PPA22733:pp270 | ||||||||
| Corresponding_transcript | PPA22733.1 | ||||||||
| Other_sequence | CJC15186_1 | ||||||||
| CRC00849_1 | |||||||||
| CR02042 | |||||||||
| PPC07044_1 | |||||||||
| Acan_isotig10001 | |||||||||
| FD517190.1 | |||||||||
| CBC06128_1 | |||||||||
| FK804485.1 | |||||||||
| CSC00931_1 | |||||||||
| Hbac_isotig02821 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_64295 | |||||||
| GPL14372_Probes_64296 | |||||||||
| GPL14372_Probes_64297 | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-sgn-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
