WormBase Tree Display for Gene: WBGene00111213

WBGene00111213 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 8
    Name: CGC_name: Ppa-cgef-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA21659
      Molecular_name: PPA21659
        PPA21659.1
        PP60287
      Other_name: GENEPREDICTION_SNAP300000078400
        GENEPREDICTION_SNAP300000078401
        UMM-S207-6.51 Person_evidence: WBPerson606
      Public_name: Ppa-cgef-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:06 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:51 WBPerson4055 Event: Acquires_merge: WBGene00111214
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00204842
        4 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-cgef-1
        5 08 Feb 2019 15:42:28 WBPerson1983 Name_change: CGC_name: Removed
        6 08 May 2019 10:09:24 WBPerson1983 Name_change: CGC_name: Ppa-cgef-1
        7 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        8 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-cgef-1
      Acquires_merge: WBGene00111214
        WBGene00204842
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cgef
    RNASeq_FPKM: WBls:0000032 0.993633 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.993633 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        1.11349 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        2.34684 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00183073
    Ortholog (52)
    Paralog: WBGene00089796 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090011 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00090599 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00100026 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103518 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity. Is an ortholog of C. elegans cgef-1. In C. elegans, cgef-1 is involved in protein localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA21659
    Corresponding_transcript: PPA21659.1
    Other_sequence (37)
  Experimental_info: Microarray_results: GPL14372_Probes_24448
      GPL14372_Probes_24450
      GPL14372_Probes_24451
      GPL14372_Probes_24452
      GPL14372_Probes_24453
      GPL14372_Probes_24454
      GPL14372_Probes_24456
      GPL14372_Probes_77604
      GPL14372_Probes_77605
      GPL14372_Probes_77606
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Remark: [190208 pad] The CGC name Ppa-cgef-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-cgef-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene