WormBase Tree Display for Gene: WBGene00106891

WBGene00106891 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 6
    Name: Sequence_name: PPA17337
      Molecular_name: PPA17337
        PPA17337.1
        PP67175
      Other_name: GENEPREDICTION_SNAP300000073764
        GENEPREDICTION_SNAP300000076350
        UMA-S407-3.105 Person_evidence: WBPerson606
      Public_name: PPA17337
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:50 WBPerson4055 Event: Acquires_merge: WBGene00109318
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-unc-116
        4 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        5 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-unc-116
        6 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
      Acquires_merge: WBGene00109318
    Status: Live
  Gene_info: Biotype: SO:0001217
    RNASeq_FPKM: WBls:0000032 8.29747 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 13.5444 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        32.3357 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        8.29747 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    GO_annotation: 00181001
      00181002
      00181003
      00181004
    Ortholog (30)
    Paralog (17)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Is an ortholog of C. elegans vab-8. In C. elegans, vab-8 is involved in several processes, including egg-laying behavior; generation of neurons; and negative regulation of motor neuron migration. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA17337
    Corresponding_transcript: PPA17337.1
    Other_sequence: EW743043.1
      MIC04299_1
      HCC11112_1
      EX549329.1
      FC814670.1
      EX557421.1
      Hbac_isotig01437
      Acan_isotig21967
      EX542562.1
      EX545934.1
      EX015124.1
      Tcol_isotig24319
      HGC01599_1
      JI165575.1
      JI165565.1
      FC542321.1
      TSC10994_1
      SRC06833_1
      HGC05570_1
      HBC03450_1
      EX541822.1
      TMC01337_1
      JI467657.1
      JI172690.1
      EL784559.1
      SRC07183_1
      ES563310.1
      Oden_isotig23101
      PPC14754_1
      MCC01835_1
      JI482492.1
      MJ02516
      CRC11633_1
      CRC03722_1
      PT01438
      TM01645
      FC820749.1
      Acan_isotig07509
      Oden_isotig14067
      PPC08010_1
      ACC10128_1
      ACC12827_1
      Dviv_isotig09823
      PPC05006_1
      GR977273.1
      ACC22242_1
      TSC13576_1
      ES566174.1
      ACC03993_1
      Oden_isotig14066
      Dviv_isotig09822
      MIC08272_1
      PPC07660_1
      JI257098.1
      MJC01582_1
      ACC35427_1
      MCC00283_1
      SC01510
      Hbac_isotig04981
      EX538698.1
      Dviv_isotig09821
      HG01275
      JO467707.1
      HBC04364_1
      MI08671
      FK805708.1
      MH03396
      MC03208
      CR04309
      PP01001
      ES742691.1
      EW744280.1
      MIC09267_1
      PTC00907_1
      ES570575.1
      Oden_isotig28554
      Dviv_isotig09820
      MC00158
      MHC00464_1
      EL784477.1
      MIC05294_1
  Experimental_info: Microarray_results: GPL14372_Probes_3909
      GPL14372_Probes_3910
      GPL14372_Probes_3911
      GPL14372_Probes_3912
      GPL14372_Probes_3913
      GPL14372_Probes_57102
      GPL14372_Probes_57103
      GPL14372_Probes_57104
      GPL14372_Probes_57105
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041466:PP_germline-ablation_regulated
  Remark: [190208 pad] The CGC name Ppa-unc-116 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-unc-116 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene