WormBase Tree Display for Gene: WBGene00106664
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| WBGene00106664 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-nhr-8 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA17110 | ||||||||
| Molecular_name | PPA17110 | ||||||||
| PPA17110.1 | |||||||||
| PP31318 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000073823 | ||||||||
| GENEPREDICTION_SNAP300000073824 | |||||||||
| UMM-S233-10.35 | Person_evidence | WBPerson606 | |||||||
| Ppa-cal-3 | From_analysis | Inferred_from_orthology | |||||||
| Ppa-nhr-8.1 | From_analysis | Inferred_from_orthology | |||||||
| Public_name | Ppa-nhr-8 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106665 | ||||
| 3 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-nhr-8 | ||||
| Other_name | Ppa-cal-3 | ||||||||
| 4 | 26 Sep 2019 11:43:14 | WBPerson4055 | Event | Split_into | WBGene00304997 | ||||
| 5 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-nhr-8.1 | ||||
| Other_name | Ppa-nhr-8 | ||||||||
| 6 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-nhr-8 | ||||
| Other_name | Ppa-nhr-8.1 | ||||||||
| Acquires_merge | WBGene00106665 | ||||||||
| Split_into | WBGene00304997 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 26.8087 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 8.93623 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00180846 | ||||||||
| Ortholog (46) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans nhr-8. In C. elegans, nhr-8 is involved in cholesterol homeostasis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17110 | |||||||
| Corresponding_CDS_history | PPA17110:pp273 | ||||||||
| Corresponding_transcript | PPA17110.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_71318 | |||||||
| GPL14372_Probes_71319 | |||||||||
| GPL14372_Probes_71320 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
