WormBase Tree Display for Gene: WBGene00103561
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| WBGene00103561 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | Ppa-lea-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA14007 | ||||||||
| Molecular_name | PPA14007 | ||||||||
| PPA14007.1 | |||||||||
| PP51528 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000070804 | ||||||||
| GENEPREDICTION_SNAP300000073438 | |||||||||
| GENEPREDICTION_SNAP300000073442 | |||||||||
| GENEPREDICTION_SNAP300000073443 | |||||||||
| UMM-S2847-5.22 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-lea-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106267 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106271 | ||||
| 4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106272 | ||||
| Acquires_merge | WBGene00106272 | ||||||||
| WBGene00106267 | |||||||||
| WBGene00106271 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lea | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0.762191 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.554093 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0.762191 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 0.900087 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (56) | |||||||||
| Paralog | WBGene00113513 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: FERM C-terminal PH-like domain; FERM, C-terminal PH-like domain; FERM, N-terminal; FERM N-terminal domain; FERM central domain; FERM superfamily, second domain; FERM/acyl-CoA-binding protein superfamily; Ubiquitin-like domain superfamily; PDZ superfamily; Band 4.1 domain; PDZ domain; and KIND domain. Is an ortholog of C. elegans lea-1. In C. elegans, lea-1 is involved in hyperosmotic response; response to desiccation; and response to heat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA14007 | |||||||
| Corresponding_transcript | PPA14007.1 | ||||||||
| Other_sequence | DI00570 | ||||||||
| JO470232.1 | |||||||||
| AS10211 | |||||||||
| JI164446.1 | |||||||||
| Tcir_isotig15714 | |||||||||
| PPC15404_1 | |||||||||
| CBC08698_1 | |||||||||
| FC818262.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_23814 | |||||||
| GPL14372_Probes_23815 | |||||||||
| GPL14372_Probes_23816 | |||||||||
| GPL14372_Probes_23818 | |||||||||
| GPL14372_Probes_23821 | |||||||||
| GPL14372_Probes_23822 | |||||||||
| GPL14372_Probes_76377 | |||||||||
| Expression_cluster | WBPaper00041606:PP_X.nematophila_regulated | ||||||||
| Method | Gene |
