WormBase Tree Display for Gene: WBGene00102462
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| WBGene00102462 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-che-12 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA12908 | ||||||||
| Molecular_name | PPA12908 | ||||||||
| PPA12908.1 | |||||||||
| PP64476 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000069754 | ||||||||
| GENEPREDICTION_SNAP300000069756 | |||||||||
| GENEPREDICTION_SNAP300000069758 | |||||||||
| UMM-S2844-12.21 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-che-12 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2011 16:33:15 | WBPerson2970 | Name_change | CGC_name | Removed | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00102464 | ||||
| 4 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00102466 | ||||
| 5 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-che-12 | ||||
| 6 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-che-12 | ||||
| 8 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-che-12 | ||||
| Acquires_merge | WBGene00102464 | ||||||||
| WBGene00102466 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | che | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0.788426 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.262809 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00107478 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: CLASP N-terminal domain; TOG domain; Armadillo-type fold; CLASP N terminal; and Armadillo-like helical. Is an ortholog of C. elegans che-12. In C. elegans, che-12 is involved in several processes, including chemotaxis; cilium assembly; and hyperosmotic response. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA12908 | |||||||
| Corresponding_transcript | PPA12908.1 | ||||||||
| Other_sequence | MI02215 | ||||||||
| Dviv_isotig24781 | |||||||||
| Dviv_isotig22699 | |||||||||
| MIC07255_1 | |||||||||
| Acan_isotig10962 | |||||||||
| AY534890.1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_26203 | |||||||
| GPL14372_Probes_26204 | |||||||||
| GPL14372_Probes_26205 | |||||||||
| GPL14372_Probes_81035 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-che-12 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-che-12 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
