WormBase Tree Display for Gene: WBGene00102397
expand all nodes | collapse all nodes | view schema
| WBGene00102397 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-egl-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA12843 | ||||||||
| Molecular_name | PPA12843 | ||||||||
| PPA12843.1 | |||||||||
| PP71558 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000069255 | ||||||||
| GENEPREDICTION_SNAP300000069256 | |||||||||
| UMM-S71-4.60 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-egl-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-egl-2 | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00102398 | ||||
| 4 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-egl-2 | ||||
| 6 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-egl-2 | ||||
| Acquires_merge | WBGene00102398 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | egl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.14229 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.830423 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 1.14229 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 1.34898 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00179074 | ||||||||
| 00179075 | |||||||||
| 00179076 | |||||||||
| 00179077 | |||||||||
| 00179078 | |||||||||
| 00179079 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00089789 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00091942 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00096989 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278424 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278727 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans egl-2. In C. elegans, egl-2 is involved in chemosensory behavior; egg-laying behavior; and muscle contraction. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA12843 | |||||||
| Corresponding_transcript | PPA12843.1 | ||||||||
| Other_sequence | JI218900.1 | ||||||||
| SRC00461_1 | |||||||||
| HG09527 | |||||||||
| JI182523.1 | |||||||||
| JI215500.1 | |||||||||
| JI479248.1 | |||||||||
| HGC05587_1 | |||||||||
| SR01532 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_6386 | |||||||
| GPL14372_Probes_6387 | |||||||||
| GPL14372_Probes_6389 | |||||||||
| GPL14372_Probes_6390 | |||||||||
| GPL14372_Probes_49040 | |||||||||
| GPL14372_Probes_49041 | |||||||||
| GPL14372_Probes_49042 | |||||||||
| GPL14372_Probes_49043 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-egl-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-egl-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
