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WormBase Tree Display for Gene: WBGene00091942

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Name Class

WBGene00091942SMapS_parentSequencePPA_ChrIII
IdentityVersion1
NameCGC_namePpa-tax-4From_analysisInferred_from_orthology
Sequence_namePPA02388
Molecular_namePPA02388
PPA02388.1
PP65667
Other_nameGENEPREDICTION_SNAP300000060049
UMA-S50-12.70Person_evidenceWBPerson606
Public_namePpa-tax-4
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:03WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtax
RNASeq_FPKMWBls:00000323.06074From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.02025From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00174229
00174230
00174231
00174232
Ortholog (34)
ParalogWBGene00089789Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096989Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102397Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278424Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278727Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans tax-4. In C. elegans, tax-4 is involved in several processes, including detection of stimulus; positive regulation of macromolecule biosynthetic process; and response to temperature stimulus.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA02388
Corresponding_transcriptPPA02388.1
Other_sequence (15)
Experimental_infoMicroarray_resultsGPL14372_Probes_3601
GPL14372_Probes_3603
GPL14372_Probes_3606
GPL14372_Probes_3607
ReferenceWBPaper00063620
MethodGene