WormBase Tree Display for Gene: WBGene00096912
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WBGene00096912 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 6 | |||||||
Name | CGC_name | Ppa-lip-1 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA07358 | ||||||||
Molecular_name | PPA07358 | ||||||||
PPA07358.1 | |||||||||
PP63403 | |||||||||
Other_name | GENEPREDICTION_SNAP300000063773 | ||||||||
UMM-S233-16.45 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-lip-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-lip-1 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
4 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-lip-1 | ||||
5 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-lip-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lip | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00176704 | ||||||||
00176705 | |||||||||
00176706 | |||||||||
00176707 | |||||||||
Ortholog (30) | |||||||||
Paralog | WBGene00092163 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00092743 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00093477 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00093663 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00096089 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00096507 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00109585 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00112904 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00273212 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00281590 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable MAP kinase tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation. Is an ortholog of C. elegans lip-1. In C. elegans, lip-1 is involved in several processes, including negative regulation of Ras protein signal transduction; positive regulation of vulval development; and vulval cell fate specification. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA07358 | |||||||
Corresponding_transcript | PPA07358.1 | ||||||||
Other_sequence (13) | |||||||||
Remark | [190208 pad] The CGC name Ppa-lip-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[210528 pad] The CGC name Ppa-lip-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |