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WormBase Tree Display for Gene: WBGene00093507

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Name Class

WBGene00093507SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameSequence_namePPA03953
Molecular_namePPA03953
PPA03953.1
PP58218
Other_nameGENEPREDICTION_SNAP300000060373
UMA-S7-6.45Person_evidenceWBPerson606
Public_namePPA03953
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:13WBPerson4025Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00175068
00175069
00175070
00175071
00175072
00175073
00175074
00175075
OrthologWBGene00073565Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00073929Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00073931Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00074415Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075073Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075396Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00075607Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00141395Caenorhabditis brenneriFrom_analysisOMA
WBGene00192500Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00193924Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00033345Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00225941Brugia malayiFrom_analysisWormBase-Compara
WBGene00006765Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00122978Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00237404Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g10134Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g12298Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g12157Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14386Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g6755Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g7570Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2929Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g2547Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2548Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2549Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2550Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10880Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g24226Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00002.g223Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00002.g225Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_05588.g19696Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-29Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_I.g2178Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20561Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00231.g7575Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_05101Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002504Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00938Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00939Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g13306Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10121400Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00059982Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrI_pilon.g1698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00259990Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00259991Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (120)
Structured_descriptionAutomated_descriptionPredicted to enable acetylcholine-gated monoatomic cation-selective channel activity and transmembrane signaling receptor activity. Predicted to be involved in monoatomic ion transmembrane transport. Predicted to be located in postsynaptic membrane. Is an ortholog of C. elegans unc-29. In C. elegans, unc-29 is involved in several processes, including neuromuscular synaptic transmission; positive regulation of acetylcholine secretion, neurotransmission; and regulation of multicellular organismal process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA03953
Corresponding_transcriptPPA03953.1
Other_sequencePPC08485_1
Acan_isotig14139
FG354765.1
JI257357.1
Experimental_infoMicroarray_resultsGPL14372_Probes_109
GPL14372_Probes_110
GPL14372_Probes_111
GPL14372_Probes_112
GPL14372_Probes_113
GPL14372_Probes_114
GPL14372_Probes_115
GPL14372_Probes_116
GPL14372_Probes_117
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
Remark[180319 gw3] The CGC name Ppa-unc-29 was deleted as there was no evidence to support it.Curator_confirmedWBPerson4025
MethodGene