WormBase Tree Display for Gene: WBGene00093127

WBGene00093127 SMap: S_parent: Sequence: PPA_ChrV
  Identity: Version: 6
    Name: CGC_name: Ppa-strl-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA03573
      Molecular_name: PPA03573
        PPA03573.1
        PP45164
      Other_name: GENEPREDICTION_SNAP300000059917
        UMM-S60-47.43 Person_evidence: WBPerson606
      Public_name: Ppa-strl-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-strl-1.1
        3 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Ppa-strl-1.1
        5 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-strl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: strl
    RNASeq_FPKM: WBls:0000032 3.33486 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.86197 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        3.33486 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        5.25106 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00174919
      00174920
      00174921
      00174922
      00174923
      00174924
      00174925
    Ortholog (32)
    Paralog: WBGene00090155 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00094734 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00098789 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113775 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00206094 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00273691 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275722 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279741 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00283501 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable chitin binding activity; cholesterol binding activity; and cholesterol transfer activity. Predicted to be involved in steroid biosynthetic process. Predicted to be located in extracellular region and mitochondrion. Is an ortholog of C. elegans strl-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03573
    Corresponding_transcript: PPA03573.1
    Other_sequence (12)
  Experimental_info: Microarray_results: GPL14372_Probes_87521
      GPL14372_Probes_87522
      GPL14372_Probes_87523
      GPL14372_Probes_87524
      GPL14372_Probes_87529
    Expression_cluster: WBPaper00041606:PP_S.marcescens_regulated
  Remark: [190208 pad] The CGC name Ppa-strl-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-strl-1.1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene