WormBase Tree Display for Gene: WBGene00092860

WBGene00092860 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 1
    Name: CGC_name: Ppa-let-60 From_analysis: Inferred_from_orthology
      Sequence_name: PPA03306
      Molecular_name: PPA03306
        PPA03306.1
        PP65787
      Other_name: GENEPREDICTION_SNAP300000059649
        UMM-S283-5.62 Person_evidence: WBPerson606
      Public_name: Ppa-let-60
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: let
    RNASeq_FPKM: WBls:0000032 6.26622 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 4.55626 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        6.26622 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        7.40256 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00174756
      00174757
      00174758
      00174759
    Ortholog (33)
    Paralog: WBGene00090497 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091142 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102177 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113391 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117419 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203549 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277005 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280690 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans let-60. In C. elegans, let-60 is involved in several processes, including learning or memory; positive regulation of receptor localization to synapse; and positive regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA03306
    Corresponding_transcript: PPA03306.1
    Other_sequence (43)
  Experimental_info: Microarray_results: GPL14372_Probes_46755
      GPL14372_Probes_46756
      GPL14372_Probes_46757
      GPL14372_Probes_46758
      GPL14372_Probes_46759
    Expression_cluster: WBPaper00041466:PP_germline-ablation_regulated
  Reference: WBPaper00002576
  Method: Gene