WormBase Tree Display for Gene: WBGene00091142

WBGene00091142 SMap: S_parent: Sequence: PPA_ChrIV
  Identity: Version: 5
    Name: CGC_name: Ppa-rap-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA01588
      Molecular_name: PPA01588
        PPA01588.1
        PP43088
      Other_name: GENEPREDICTION_SNAP300000058025
        UMM-S2854-16.60 Person_evidence: WBPerson606
      Public_name: Ppa-rap-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:03 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        3 08 May 2019 10:09:25 WBPerson1983 Name_change: CGC_name: Ppa-rap-1
        4 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        5 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-rap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rap
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00173785
      00173786
      00173787
      00173788
    Ortholog (35)
    Paralog: WBGene00090497 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00092860 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00095293 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00102177 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113391 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00117419 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00203549 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277005 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00280690 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable GTP binding activity and GTPase activity. Predicted to be involved in signal transduction. Predicted to be located in membrane. Is an ortholog of C. elegans rap-1. In C. elegans, rap-1 is involved in collagen and cuticulin-based cuticle development and epidermis development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA01588
    Corresponding_transcript: PPA01588.1
    Other_sequence (48)
  Experimental_info: Microarray_results: GPL14372_Probes_52574
      GPL14372_Probes_52575
      GPL14372_Probes_52576
  Remark: [190208 pad] The CGC name Ppa-rap-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-rap-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene