WormBase Tree Display for Gene: WBGene00090816
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| WBGene00090816 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-rog-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA01262 | ||||||||
| Molecular_name | PPA01262 | ||||||||
| PPA01262.1 | |||||||||
| PP53893 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057701 | ||||||||
| GENEPREDICTION_SNAP300000057704 | |||||||||
| GENEPREDICTION_SNAP300000059232 | |||||||||
| GENEPREDICTION_SNAP300000065760 | |||||||||
| GENEPREDICTION_SNAP300000074274 | |||||||||
| GENEPREDICTION_SNAP300000076063 | |||||||||
| UMM-S2859-7.31 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-rog-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:03 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-mtm-9 | ||||
| 3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00090819 | ||||
| 4 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00092441 | ||||
| 5 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00098772 | ||||
| 6 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00107327 | ||||
| 7 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108804 | ||||
| 8 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-rog-1 | ||||
| Acquires_merge | WBGene00098772 | ||||||||
| WBGene00092441 | |||||||||
| WBGene00090819 | |||||||||
| WBGene00107327 | |||||||||
| WBGene00108804 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rog | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00273513 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00276638 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00276653 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00278215 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00279685 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00280946 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Protein-tyrosine phosphatase-like and Myotubularin-like phosphatase domain. Is an ortholog of C. elegans rog-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA01262 | |||||||
| Corresponding_transcript | PPA01262.1 | ||||||||
| Other_sequence | ACC04092_2 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_39182 | |||||||
| Remark | [180319 gw3] The CGC name Ppa-mtm-9 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
