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WormBase Tree Display for Gene: WBGene00089050

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Name Class

WBGene00089050SMapS_parentSequencecb25.fpc3857a
IdentityVersion4
NameCGC_nameCbr-lbp-1From_analysisInferred_from_orthology
Sequence_nameCBG27636
Molecular_nameCBG27636
CBG27636.1
CBP25251
Other_nameCBG_27636Accession_evidenceNDBHE600983
Public_nameCbr-lbp-1
DB_infoDatabaseNDBlocus_tagCBG_27636
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbr-lbp-1
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_nameCbr-lbp-1
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:29WBPerson1983Name_changeCGC_nameCbr-lbp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlbp
RNASeq_FPKMWBls:0000002125.271From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
200.179From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
204.062From_analysisRNASeq.briggsae.WBls:0000002.control_mean
286.737From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
193.791From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
196.985From_analysisRNASeq.briggsae.WBls:0000002.control_median
201.495From_analysisRNASeq.briggsae.WBls:0000002.control_mean
WBls:0000003114.287From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
240.063From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
365.839From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
139.964From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
206.697From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:0000004356.065From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
374.447From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
392.828From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
346.418From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
365.939From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
370.264From_analysisRNASeq.briggsae.WBls:0000004.control_mean
390.072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:000002726.1131From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
31.1855From_analysisRNASeq.briggsae.WBls:0000027.control_mean
60.7145From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
6.72898From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
43.4138From_analysisRNASeq.briggsae.WBls:0000027.control_median
47.251From_analysisRNASeq.briggsae.WBls:0000027.control_mean
95.4474From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:0000035117.686From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038104.487From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
132.141From_analysisRNASeq.briggsae.WBls:0000038.control_median
159.796From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
160.908From_analysisRNASeq.briggsae.WBls:0000038.control_mean
298.063From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
81.2856From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
WBls:0000041130.377From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
144.509From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
161.348From_analysisRNASeq.briggsae.WBls:0000041.control_median
163.949From_analysisRNASeq.briggsae.WBls:0000041.control_mean
178.188From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
202.723From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
190.456From_analysisRNASeq.briggsae.WBls:0000041.control_median
201.076From_analysisRNASeq.briggsae.WBls:0000041.control_mean
259.582From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
291.079From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:0000063136.382From_analysisRNASeq.briggsae.WBls:0000063.control_mean
153.587From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
166.833From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
177.519From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
183.972From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
166.574From_analysisRNASeq.briggsae.WBls:0000063.control_mean
172.176From_analysisRNASeq.briggsae.WBls:0000063.control_median
317.536From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:0000101130.377From_analysisRNASeq.briggsae.total_over_all_stages.control_median
154.266From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
156.691From_analysisRNASeq.briggsae.total_over_all_stages.control_median
180.883From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00172988
Ortholog (30)
ParalogWBGene00034754Caenorhabditis briggsaeFrom_analysisInparanoid_8
WormBase-Compara
WBGene00034752Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039529Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00271346Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable lipid binding activity. Is an ortholog of C. elegans lbp-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG27636
Corresponding_transcriptCBG27636.1
Other_sequence (59)
Experimental_infoExpr_patternExpr1063422
Microarray_resultsGPL14143_CBG27636_55-114_0.898_3_A
GPL14143_CBG27636_132-191_0.888_8_B
Expression_clusterWBPaper00051425:CB_L1_vs_embryo_downregulated
WBPaper00051425:CB_L4_vs_embryo_downregulated
Remark[190208 pad] The CGC name Cbr-lbp-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Cbr-lbp-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene