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WormBase Tree Display for Gene: WBGene00087183

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Name Class

WBGene00087183SMapS_parentSequencecb25.NA_155
IdentityVersion2
NameSequence_nameCBG25769
Molecular_nameCBG25769a
CBG25769a.1
CBP48653
CBG25769b
CBP48630
CBG25769c
CBP48748
CBG25769b.1
CBG25769c.1
Other_nameCBG_25769Accession_evidenceNDBHE601441
CBG_25770
Public_nameCBG25769
SpeciesCaenorhabditis briggsae
HistoryVersion_change123 Jul 2008 11:20:50WBPerson1847EventImportednGASP new gene
211 Jan 2018 16:44:22WBPerson4025EventAcquires_mergeWBGene00087184
Acquires_mergeWBGene00087184
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000000218.136From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
23.3292From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
25.0109From_analysisRNASeq.briggsae.WBls:0000002.control_mean
33.5676From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
28.4484From_analysisRNASeq.briggsae.WBls:0000002.control_median
29.001From_analysisRNASeq.briggsae.WBls:0000002.control_mean
40.9712From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:000000323.3603From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
31.4256From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
39.4909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
25.203From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
29.3514From_analysisRNASeq.briggsae.WBls:0000003.control_mean
WBls:00000049.32198From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
9.61683From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
9.91169From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
12.9137From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
6.41312From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
9.10768From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
9.53363From_analysisRNASeq.briggsae.WBls:0000004.control_mean
WBls:0000024 (12)
WBls:000002710.4241From_analysisRNASeq.briggsae.WBls:0000027.control_mean
11.4677From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
15.144From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
4.66072From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
13.3059From_analysisRNASeq.briggsae.WBls:0000027.control_median
16.918From_analysisRNASeq.briggsae.WBls:0000027.control_mean
36.3997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003516.9009From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003816.7738From_analysisRNASeq.briggsae.WBls:0000038.control_median
18.9578From_analysisRNASeq.briggsae.WBls:0000038.control_mean
25.7968From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
35.9234From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
6.36032From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
7.75083From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004116.7936From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
23.0305From_analysisRNASeq.briggsae.WBls:0000041.control_mean
24.0623From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
24.0666From_analysisRNASeq.briggsae.WBls:0000041.control_median
24.0709From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
27.1953From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
18.7738From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
20.6773From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
21.9289From_analysisRNASeq.briggsae.WBls:0000041.control_mean
22.3698From_analysisRNASeq.briggsae.WBls:0000041.control_median
WBls:000006310.0099From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
10.7572From_analysisRNASeq.briggsae.WBls:0000063.control_mean
13.2425From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
14.4432From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
6.23825From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
9.85216From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
11.433From_analysisRNASeq.briggsae.WBls:0000063.control_mean
11.6262From_analysisRNASeq.briggsae.WBls:0000063.control_median
14.8121From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
WBls:000010115.144From_analysisRNASeq.briggsae.total_over_all_stages.control_median
17.6645From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
15.9688From_analysisRNASeq.briggsae.total_over_all_stages.control_median
18.3564From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00172685
Ortholog (39)
ParalogWBGene00037822Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00038825Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00042540Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00037661Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00039596Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be involved in protein homooligomerization. Is an ortholog of C. elegans spsb-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG25769a
CBG25769b
CBG25769c
Corresponding_CDS_historyCBG25769:bp263
Corresponding_transcriptCBG25769a.1
CBG25769b.1
CBG25769c.1
Other_sequence (38)
MethodGene