WormBase Tree Display for Gene: WBGene00077698

WBGene00077698 SMap: S_parent: Sequence: C34B4
  Identity: Version: 2
    Name: CGC_name: lurp-4 Person_evidence: WBPerson260
      Sequence_name: C34B4.7
      Molecular_name: C34B4.7a
        C34B4.7a.1
        CE47207
        C34B4.7b
        CE47139
        C34B4.7b.1
        C34B4.7c
      Other_name: CELE_C34B4.7 Accession_evidence: NDB BX284605
      Public_name: lurp-4
    DB_info: Database: AceView gene C34B4.7
        WormFlux gene WBGene00077698
        NDB locus_tag CELE_C34B4.7
        Panther gene CAEEL|WormBase=WBGene00077698|UniProtKB=B2D6N2
          family PTHR37433
        NCBI gene 6418704
        RefSeq protein NM_001269550.1
            NR_102087.1
            NM_001269549.2
        TREEFAM TREEFAM_ID TF316745
        TrEMBL UniProtAcc B2D6N2
            F5GUD6
        UniProt_GCRP UniProtAcc B2D6N2
        RNAcentral URSid URS000060EF78
    Species: Caenorhabditis elegans
    History: Version_change: 1 03 Apr 2008 15:52:53 WBPerson4025 Event: Split_from: WBGene00007909
        2 17 Feb 2012 16:57:01 WBPerson2970 Name_change: CGC_name: lurp-4
      Split_from: WBGene00007909
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lurp
    Allele (26)
    RNASeq_FPKM (74)
    Ortholog (12)
    Paralog: WBGene00007607 Caenorhabditis elegans From_analysis: Panther
      WBGene00007907
      WBGene00007909 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009134 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009136 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00009679 Caenorhabditis elegans From_analysis: Panther
      WBGene00018111 Caenorhabditis elegans From_analysis: Panther
      WBGene00020144 Caenorhabditis elegans From_analysis: Panther
      WBGene00021558 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in head mesodermal cell and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and elt-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including 1-methylnicotinamide; multi-walled carbon nanotube; and 4-bromodiphenyl ether based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Ly-6 antigen/uPA receptor-like and Snake toxin-like superfamily. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C34B4.7a
      C34B4.7b
    Corresponding_CDS_history: C34B4.7a:wp230
    Corresponding_transcript: C34B4.7c
      C34B4.7a.1
      C34B4.7b.1
    Associated_feature: WBsf232738
  Experimental_info: RNAi_result: WBRNAi00070168 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023561
      Expr1145852
      Expr2013310
      Expr2031541
    Microarray_results (13)
    Expression_cluster (72)
    SAGE_tag: SAGE:taaaagatct Strand: Sense
        Unambiguously_mapped
      SAGE:acaaatgaaa Strand: Sense
        Unambiguously_mapped
      SAGE:ttctgaaagt Strand: Antisense
      SAGE:taattttgtt Strand: Antisense
      SAGE:ctttatataa Strand: Antisense
      SAGE:atagatatga Strand: Sense
        Unambiguously_mapped
      SAGE:acaaatgaaacttatgt Strand: Sense
        Unambiguously_mapped
      SAGE:atcattattg Strand: Antisense
  Map_info: Map: V Position: 4.87321
    Positive: Positive_clone: C34B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene