WormBase Tree Display for Gene: WBGene00063308

WBGene00063308 SMap: S_parent: Sequence: Crem_Contig45
  Identity: Version: 3
    Name: CGC_name: Cre-nkat-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE27710
      Molecular_name: CRE27710
        CRE27710.1
        RP09228
      Other_name: cr01.sctg37.wum.90
      Public_name: Cre-nkat-1.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:27 WBPerson1847 Event: Created
        2 03 Jul 2008 11:45:51 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE27710
                Other_name: cr01.sctg37.wum.90
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-nkat-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nkat
    RNASeq_FPKM: WBls:0000004 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
            RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
            RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
      WBls:0000024 (16)
      WBls:0000027 0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
            RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
            RNASeq.remanei.WBls:0000027.control_mean
            RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.275409 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.344976 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        0.48125 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 0.078115 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.091027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.148191 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.270632 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.281799 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.415406 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        0.436418 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.454635 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.190314 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        0.380628 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.404042 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0.591013 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.966538 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
        1.70045 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        2.45847 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
      WBls:0000101 0.039058 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.321544 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00158798
      00158799
    Ortholog (30)
    Paralog: WBGene00058648 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00066931 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00052345 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00058557 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060597 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00061614 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00076216 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00076593 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00075597 Caenorhabditis remanei From_analysis: GeneACeDB-Compara
    Structured_description: Automated_description: Predicted to enable pyridoxal phosphate binding activity. Predicted to be involved in biosynthetic process. Is an ortholog of C. elegans nkat-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE27710
    Corresponding_transcript: CRE27710.1
    Other_sequence: HG01704
      ES742811.1
      SR03602
      HGC02324_1
      Name_isotig08170
  Experimental_info: Expr_pattern: Expr1111122
    Microarray_results: GPL14146_CRE27710_1152-1211_0.926_3_A
  Method: Gene