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WormBase Tree Display for Gene: WBGene00058841

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Name Class

WBGene00058841SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-pcm-1From_analysisInferred_from_orthology
Sequence_nameCRE31088
Molecular_nameCRE31088
CRE31088.1
RP21615
Other_namecr01.sctg13.wum.31
Public_nameCre-pcm-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-pcm-1
303 Jul 2008 11:45:21WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE31088
Other_namecr01.sctg13.wum.31
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpcm
RNASeq_FPKMWBls:000000418.8649From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
21.702From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
24.5391From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:00000272.66265From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
4.01602From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
5.94155From_analysisRNASeq.remanei.WBls:0000027.control_mean
6.1742From_analysisRNASeq.remanei.WBls:0000027.control_median
8.33238From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
8.75516From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
WBls:000003811.6091From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
14.4194From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
2.42653From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
9.48501From_analysisRNASeq.remanei.WBls:0000038.control_mean
WBls:000004113.9958From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
14.4231From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
18.9673From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
30.5268From_analysisRNASeq.remanei.WBls:0000041.control_mean
30.6025From_analysisRNASeq.remanei.WBls:0000041.control_median
42.2377From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
44.5219From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
49.0148From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
WBls:0000063 (12)
WBls:000010114.2076From_analysisRNASeq.remanei.total_over_all_stages.control_median
16.0178From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00154309
00154310
Ortholog (33)
ParalogWBGene00060551Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein-L-isoaspartate (D-aspartate) O-methyltransferase activity. Predicted to be involved in protein modification process. Is an ortholog of C. elegans pcm-1. In C. elegans, pcm-1 is involved in multicellular organismal response to stress; regulation of autophagy; and response to starvation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE31088
Corresponding_transcriptCRE31088.1
Other_sequence (53)
Experimental_infoExpr_patternExpr1099992
Microarray_resultsGPL14146_CRE31088_508-567_0.960_2_B
GPL14146_CRE31088_583-642_0.949_3_C
GPL14146_CRE31088_679-738_0.978_1_A
MethodGene