WormBase Tree Display for Gene: WBGene00058577

WBGene00058577 SMap: S_parent: Sequence: Crem_Contig27
  Identity: Version: 6
    Name: CGC_name: Cre-pag-3.1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE15406
      Molecular_name: CRE15406
        CRE15406.1
        RP48836
      Other_name: cr01.sctg12.wum.82
        Cre-pag-3 From_analysis: Inferred_from_orthology
      Public_name: Cre-pag-3.1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:49 WBPerson2970 Name_change: CGC_name: Cre-pag-3
        3 03 Jul 2008 11:45:19 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE15406
                Other_name: cr01.sctg12.wum.82
        4 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cre-pag-3.1
                Other_name: Cre-pag-3
        5 01 Oct 2019 10:47:49 WBPerson1983 Name_change: CGC_name: Cre-pag-3
                Other_name: Cre-pag-3.1
        6 27 Nov 2019 12:48:14 WBPerson1983 Name_change: CGC_name: Cre-pag-3.1
                Other_name: Cre-pag-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pag
    RNASeq_FPKM: WBls:0000004 0.530492 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        0.812986 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.09548 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 0.455877 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        0.783182 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        0.893378 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        1.33088 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.34597 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
      WBls:0000038 0.151745 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        0.455236 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
            RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 0.097573 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.115725 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        0.119869 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        0.223213 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        0.242188 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        0.326557 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        0.383133 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        0.410273 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 0.119711 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        0.263736 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        0.333064 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        0.600314 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        0 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
            RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
            RNASeq.remanei.WBls:0000063.control_median
      WBls:0000101 0.117797 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        0.302468 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    Ortholog (31)
    Paralog (39)
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; C2H2-type zinc finger; and Zinc finger C2H2-type. Is an ortholog of C. elegans pag-3. In C. elegans, pag-3 is involved in several processes, including negative regulation of secretion by cell; neuroblast fate specification; and regulation of locomotion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE15406
    Corresponding_transcript: CRE15406.1
    Other_sequence (15)
  Experimental_info: Expr_pattern: Expr1113488
    Microarray_results: GPL14146_CRE07651_359-418_0.888_21_A
      GPL14146_CRE07651_662-721_0.952_4_B
  Method: Gene