WormBase Tree Display for Gene: WBGene00057913

WBGene00057913 SMap: S_parent: Sequence: Crem_Contig3
  Identity: Version: 3
    Name: CGC_name: Cre-sos-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE18636
      Molecular_name: CRE18636
        CRE18636.1
        RP29770
      Other_name: cr01.sctg10.wum.200
      Public_name: Cre-sos-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-sos-1
        3 03 Jul 2008 11:45:15 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE18636
                Other_name: cr01.sctg10.wum.200
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sos
    RNASeq_FPKM: WBls:0000004 33.3502 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        34.1852 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        35.0201 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 15.5178 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        17.3098 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.3979 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        19.4859 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        20.6366 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        4.63908 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 15.4129 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        18.5532 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        21.28 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        6.4056 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
      WBls:0000041 20.9078 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        21.1961 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        33.8669 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        35.8789 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        36.0974 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        6.13468 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        7.25039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        7.94862 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 11.2699 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        15.5785 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00153423
      00153424
      00153425
    Ortholog (26)
    Paralog: WBGene00051706 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00052028 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00054934 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00065658 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00071955 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00072337 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable guanyl-nucleotide exchange factor activity and protein heterodimerization activity. Predicted to be involved in small GTPase mediated signal transduction. Is an ortholog of C. elegans sos-1. In C. elegans, sos-1 is involved in several processes, including epidermal growth factor receptor signaling pathway; female gamete generation; and positive regulation of vulval development. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE18636
    Corresponding_transcript: CRE18636.1
    Other_sequence: HGC04233_1
      MC02898
      Acan_isotig07592
      MCC02196_1
      OOC02542_1
      Hbac_isotig02047
      JI166030.1
      JI472095.1
      HG08934
  Experimental_info: Expr_pattern: Expr1108666
    Microarray_results: GPL14146_CRE18636_1191-1250_0.801_107_B
      GPL14146_CRE18636_1977-2036_0.768_193_A
      GPL14146_CRE18636_3324-3383_0.776_174_C
  Method: Gene