WormBase Tree Display for Gene: WBGene00054230

WBGene00054230 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 4
    Name: CGC_name: Cre-unc-104 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26470
      Molecular_name: CRE26470
        CRE26470.1
        RP33458
      Other_name: cr01.sctg3.wum.246
        cr01.sctg3.wum.246.2
      Public_name: Cre-unc-104
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26470
                Other_name: cr01.sctg3.wum.246
        3 03 Jul 2008 11:48:40 WBPerson4055 Event: Acquires_merge: WBGene00054231
              Name_change: Other_name: cr01.sctg3.wum.246.2
        4 04 Jul 2008 11:06:35 WBPerson4055 Name_change: CGC_name: Cre-unc-104
      Acquires_merge: WBGene00054231
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0.81211 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.07061 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.3291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 13.1936 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        14.9192 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        16.3916 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        17.8641 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.1469 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.8443 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 0.965949 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.47949 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.14995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        9.32258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.97196 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.44553 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.4476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.92665 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.9726 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.4057 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.74583 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        5.81896 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 (12)
      WBls:0000101 2.6955 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.8904 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149555
      00149556
      00149557
      00149558
    Ortholog: WBGene00006831 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032363 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00137339 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192754 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00117727 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223161 Brugia malayi From_analysis: WormBase-Compara
      WBGene00207185 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00208428 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216088 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246819 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00203741 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276772 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g7459 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11865 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g12288 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4426 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1282 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17398 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11354 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10022 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g174 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22283 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8423 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00458.g11091 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-104 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12131 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00267.g8321 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16956 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006395 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02329 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13441 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g13443 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20265400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4910 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266694 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287770 Trichuris muris From_analysis: WormBase-Compara
    Paralog (25)
    Structured_description: Automated_description: Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Is an ortholog of C. elegans unc-104. In C. elegans, unc-104 is involved in several processes, including chemical synaptic transmission; regulation of cellular component organization; and regulation of cellular localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26470
    Corresponding_transcript: CRE26470.1
    Other_sequence (60)
  Experimental_info: Expr_pattern: Expr1117252
    Microarray_results: GPL14146_CRE26470_4593-4652_0.938_2_C
      GPL14146_CRE26470_4681-4740_0.921_8_A
      GPL14146_CRE26470_4778-4837_0.934_4_B
  Method: Gene