WormBase Tree Display for Gene: WBGene00054230

WBGene00054230 SMap: S_parent: Sequence: Crem_Contig6
  Identity: Version: 4
    Name: CGC_name: Cre-unc-104 From_analysis: Inferred_from_orthology
      Sequence_name: CRE26470
      Molecular_name: CRE26470
        CRE26470.1
        RP33458
      Other_name: cr01.sctg3.wum.246
        cr01.sctg3.wum.246.2
      Public_name: Cre-unc-104
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 03 Jul 2008 11:44:48 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE26470
                Other_name: cr01.sctg3.wum.246
        3 03 Jul 2008 11:48:40 WBPerson4055 Event: Acquires_merge: WBGene00054231
              Name_change: Other_name: cr01.sctg3.wum.246.2
        4 04 Jul 2008 11:06:35 WBPerson4055 Name_change: CGC_name: Cre-unc-104
      Acquires_merge: WBGene00054231
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000004 0.81211 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        1.07061 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.3291 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 10.6184 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
        10.7288 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
        10.9097 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
        11.1316 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
        11.5653 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
        11.8681 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
        12.0054 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
        12.5662 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
        13.4316 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
        14.0207 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
        14.1315 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
        14.3556 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
        14.4774 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
        14.4836 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
        14.5133 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
        15.958 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
        16.4821 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
        16.6482 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
        16.8356 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
        17.6855 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
        17.8697 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
        18.125 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
        18.1666 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
        18.2705 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
        18.6043 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
        18.7208 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
        18.8176 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
        19.4048 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
        19.5279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
        20.4205 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
        21.3065 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
        21.792 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
        22.3989 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
        22.5177 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
        24.7328 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
        25.8859 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
        26.235 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
        27.6491 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
        28.5262 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
        28.8849 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
        30.3123 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
        34.0479 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
        34.5458 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
        34.7445 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
        37.8081 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
        40.4183 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
        41.2113 From_analysis: RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
        44.4649 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
        58.5286 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
        67.7039 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
        7.24736 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
        8.69519 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
        8.83574 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
      WBls:0000027 13.1936 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        14.9192 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        16.3916 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        17.8641 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        18.1469 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        1.8443 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
      WBls:0000038 0.965949 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        6.47949 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.14995 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
        9.32258 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
      WBls:0000041 1.97196 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.44553 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.4476 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        3.92665 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        3.9726 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        5.4057 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        5.74583 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
        5.81896 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
      WBls:0000063 0.867289 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
        1.81011 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
        1.95104 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
        2.02034 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
        2.25352 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
        2.59846 From_analysis: RNASeq.remanei.WBls:0000063.control_median
        2.89606 From_analysis: RNASeq.remanei.WBls:0000063.control_mean
        2.94341 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
        3.5064 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
        4.1916 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
        4.35489 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
        5.06205 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
      WBls:0000101 2.6955 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.8904 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00149555
      00149556
      00149557
      00149558
    Ortholog: WBGene00006831 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032363 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00137339 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192754 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00117727 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00223161 Brugia malayi From_analysis: WormBase-Compara
      WBGene00207185 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00208428 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00216088 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246819 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00203741 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276772 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g7459 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11865 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g12288 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4426 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1282 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17398 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11354 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10022 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g174 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22283 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8423 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00458.g11091 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-104 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12131 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00267.g8321 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_16956 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006395 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02329 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g13441 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g13443 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20265400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4910 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00266694 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287770 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00052031 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00051591 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00052455 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00053573 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00054082 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00055826 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00057695 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00059346 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00059442 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00059913 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00060018 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00061895 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062576 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00062981 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065337 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00065355 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00066073 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00068383 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00072306 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00073938 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00074454 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00075881 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00078642 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00083037 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00085523 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Is an ortholog of C. elegans unc-104. In C. elegans, unc-104 is involved in several processes, including chemical synaptic transmission; regulation of cellular component organization; and regulation of cellular localization. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE26470
    Corresponding_transcript: CRE26470.1
    Other_sequence: HS00512
      JI213183.1
      MI03176
      ACC18389_1
      ACC36998_1
      FK804742.1
      BE225597.1
      FC552634.1
      MIC01332_1
      AS08146
      PTC02676_1
      JI171807.1
      MI00328
      FK806161.1
      JI170778.1
      PT02581
      CBC17347_1
      HCC01536_1
      DIC01056_1
      EX561186.1
      FC552076.1
      ACC23825_1
      MCC00256_1
      Hbac_isotig02018
      EY470277.1
      EX558158.1
      JI229006.1
      JI238240.1
      ACC22934_1
      FK806169.1
      ASC24181_1
      PPC00301_1
      Acan_isotig02694
      MH03396
      JI467915.1
      XI02454
      PP01342
      JI481289.1
      Dviv_isotig24707
      Acan_isotig02693
      MHC00464_1
      Oden_isotig19032
      Tcol_isotig26919
      JI250850.1
      MIC03972_1
      FC551905.1
      MC00638
      FC552414.1
      GP00510
      MIC02709_1
      JI220077.1
      HC03275
      ACC03014_1
      PT03428
      PTC02101_1
      EY460670.1
      EY465479.1
      EX560836.1
      ACC22228_1
      DI01831
  Experimental_info: Expr_pattern: Expr1117252
    Microarray_results: GPL14146_CRE26470_4593-4652_0.938_2_C
      GPL14146_CRE26470_4681-4740_0.921_8_A
      GPL14146_CRE26470_4778-4837_0.934_4_B
  Method: Gene