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WormBase Tree Display for Gene: WBGene00053917

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Name Class

WBGene00053917SMapS_parentSequenceCrem_Contig1
IdentityVersion3
NameCGC_nameCre-nrde-3.2From_analysisInferred_from_orthology
Sequence_nameCRE01947
Molecular_nameCRE01947
CRE01947.1
RP26903
Other_namecr01.sctg2.wum.692
Public_nameCre-nrde-3.2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
203 Jul 2008 11:44:46WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01947
Other_namecr01.sctg2.wum.692
320 Mar 2018 10:26:12WBPerson4025Name_changeCGC_nameCre-nrde-3.2
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnrde
RNASeq_FPKMWBls:0000004112.082From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
112.736From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
113.39From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002724.4018From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
34.0967From_analysisRNASeq.remanei.WBls:0000027.control_mean
35.8675From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
36.4528From_analysisRNASeq.remanei.WBls:0000027.control_median
37.038From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
39.0796From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
WBls:000003814.9924From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
16.2103From_analysisRNASeq.remanei.WBls:0000038.control_mean
16.5345From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
17.1039From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:000004114.3289From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
14.7469From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
14.7524From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
18.7957From_analysisRNASeq.remanei.WBls:0000041.control_median
21.4535From_analysisRNASeq.remanei.WBls:0000041.control_mean
22.8391From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
27.9557From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
34.0982From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
WBls:0000063 (12)
WBls:000010114.7497From_analysisRNASeq.remanei.total_over_all_stages.control_median
22.9115From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00149208
00149209
Ortholog (26)
Paralog (36)
Structured_descriptionAutomated_descriptionPredicted to enable RNA binding activity. Is an ortholog of C. elegans nrde-3. In C. elegans, nrde-3 is involved in RNA import into nucleus; olfactory learning; and regulation of gene expression.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01947
Corresponding_transcriptCRE01947.1
Other_sequence (21)
Experimental_infoExpr_patternExpr1115759
Microarray_resultsGPL14146_CRE01947_2243-2302_0.851_59_C
GPL14146_CRE01947_2442-2501_0.908_7_B
GPL14146_CRE01947_2500-2559_0.875_27_A
MethodGene