WormBase Tree Display for Gene: WBGene00052219

WBGene00052219 SMap: S_parent: Sequence: Crem_Contig8
  Identity: Version: 3
    Name: CGC_name: Cre-dbl-1 From_analysis: Inferred_from_orthology
      Sequence_name: CRE30910
      Molecular_name: CRE30910
        CRE30910.1
        RP25474
      Other_name: cr01.sctg1.wum.107
      Public_name: Cre-dbl-1
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:25 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:48 WBPerson2970 Name_change: CGC_name: Cre-dbl-1
        3 03 Jul 2008 11:44:31 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE30910
                Other_name: cr01.sctg1.wum.107
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dbl
    RNASeq_FPKM: WBls:0000004 1.89583 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
        1.92601 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        1.95619 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
      WBls:0000024 (53)
      WBls:0000027 10.0821 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
        10.2464 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        1.95854 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        20.1027 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        8.02069 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.13354 From_analysis: RNASeq.remanei.WBls:0000027.control_median
      WBls:0000038 0.661059 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        4.68432 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        5.96912 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
            RNASeq.remanei.WBls:0000038.control_median
        7.42279 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
      WBls:0000041 1.5662 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        1.64614 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        2.2721 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        2.42053 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        2.5658 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.85951 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        2.92471 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        3.25454 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 2.88195 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.30569 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00147427
      00147428
    Ortholog: WBGene00000936 Caenorhabditis elegans From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00006570 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00038298 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00150332 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00141739 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00155807 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00148146 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135411 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00133460 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00223175 Brugia malayi From_analysis: WormBase-Compara
      WBGene00243557 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00106562 Pristionchus pacificus From_analysis: WormBase-Compara
      CBOVI.g874 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15433 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4789 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8787 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5562 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19683 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14641 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g12427 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24980 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21560 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-dbl-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold601.g5448 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00603.g13426 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22321 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017989 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09966 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g12396 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50220220 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14506 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00257942 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288631 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00058009 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00057532 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00063879 Caenorhabditis remanei From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00064871 Caenorhabditis remanei From_analysis: WormBase-Compara
      WBGene00064872 Caenorhabditis remanei From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans dbl-1. In C. elegans, dbl-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule metabolic process; and regulation of developmental process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE30910
    Corresponding_transcript: CRE30910.1
    Other_sequence (11)
  Experimental_info: Expr_pattern: Expr1115952
    Microarray_results: GPL14146_CRE30910_706-765_0.909_10_C
      GPL14146_CRE30910_796-855_0.929_3_B
      GPL14146_CRE30910_920-979_0.939_1_A
  Method: Gene