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WormBase Tree Display for Gene: WBGene00052219

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Name Class

WBGene00052219SMapS_parentSequenceCrem_Contig8
IdentityVersion3
NameCGC_nameCre-dbl-1From_analysisInferred_from_orthology
Sequence_nameCRE30910
Molecular_nameCRE30910
CRE30910.1
RP25474
Other_namecr01.sctg1.wum.107
Public_nameCre-dbl-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:25WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-dbl-1
303 Jul 2008 11:44:31WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE30910
Other_namecr01.sctg1.wum.107
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdbl
RNASeq_FPKMWBls:00000041.89583From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
1.92601From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.95619From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.0821From_analysisRNASeq.remanei.WBls:0000027.control_mean
10.2464From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
1.95854From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
20.1027From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
8.02069From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
9.13354From_analysisRNASeq.remanei.WBls:0000027.control_median
WBls:00000380.661059From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
4.68432From_analysisRNASeq.remanei.WBls:0000038.control_mean
5.96912From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
RNASeq.remanei.WBls:0000038.control_median
7.42279From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
WBls:00000411.5662From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
1.64614From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
2.2721From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
2.42053From_analysisRNASeq.remanei.WBls:0000041.control_mean
2.5658From_analysisRNASeq.remanei.WBls:0000041.control_median
2.85951From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
2.92471From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
3.25454From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001012.88195From_analysisRNASeq.remanei.total_over_all_stages.control_median
4.30569From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00147427
00147428
Ortholog (33)
ParalogWBGene00058009Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00057532Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00063879Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00064871Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00064872Caenorhabditis remaneiFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable growth factor activity. Predicted to be located in extracellular region. Is an ortholog of C. elegans dbl-1. In C. elegans, dbl-1 is involved in several processes, including defense response to other organism; positive regulation of macromolecule metabolic process; and regulation of developmental process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE30910
Corresponding_transcriptCRE30910.1
Other_sequence (11)
Experimental_infoExpr_patternExpr1115952
Microarray_resultsGPL14146_CRE30910_706-765_0.909_10_C
GPL14146_CRE30910_796-855_0.929_3_B
GPL14146_CRE30910_920-979_0.939_1_A
MethodGene