WormBase Tree Display for Gene: WBGene00050891

WBGene00050891 SMap: S_parent: Sequence: C08E8
  Identity: Version: 1
    Name: Sequence_name: C08E8.9
      Molecular_name: C08E8.9
        C08E8.9.1
        CE52235
      Other_name: CELE_C08E8.9 Accession_evidence: NDB BX284605
      Public_name: C08E8.9
    DB_info: Database: AceView gene C08E8.9
        WormFlux gene WBGene00050891
        NDB locus_tag CELE_C08E8.9
        NCBI gene 6418692
        RefSeq protein NM_001129371.2
        TREEFAM TREEFAM_ID TF322074
        TrEMBL UniProtAcc Q7YX97
        UniProt_GCRP UniProtAcc Q7YX97
    Species: Caenorhabditis elegans
    History: Version_change: 1 18 Sep 2007 15:10:25 WBPerson4025 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01499709
      WBVar01499566
      WBVar01596898
      WBVar01499446
      WBVar01498549
      WBVar01499840
      WBVar01499841
      WBVar01499299
      WBVar00253553
      WBVar01498957
    RNASeq_FPKM (74)
    Ortholog (17)
    Paralog: WBGene00007441 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00007442 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00013071 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Automated_description: Enriched in ASEL; ASER; PLM; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by hpl-2; hda-2; and etr-1 based on tiling array and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C08E8.9
    Corresponding_CDS_history: C08E8.9:wp261
    Corresponding_transcript: C08E8.9.1
    Associated_feature: WBsf1002871
      WBsf1021450
  Experimental_info: Expr_pattern: Expr1144176
      Expr2000610
    Microarray_results: GPL14144_C08E8.6_109-168_0.946_2_A
      GPL19516_CGZ0003393
      GPL19516_CGZ0003396
      GPL21109_C08E8.6
      GPL21109_C08E8.9
    Expression_cluster: WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00050344:ASER-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00061651:ASEL_enriched
      WBPaper00061651:ASER_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065841:35_4
  Map_info: Positive: Positive_clone: C08E8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 16.148
  Method: Gene