WormBase Tree Display for Gene: WBGene00045411

WBGene00045411 SMap: S_parent: Sequence: C25F9
  Identity: Version: 1
    Name: Sequence_name: C25F9.11
      Molecular_name: C25F9.11
        C25F9.11.1
        CE40910
      Other_name: CELE_C25F9.11 Accession_evidence: NDB BX284605
      Public_name: C25F9.11
    DB_info: Database: AceView gene 5T904
        WormFlux gene WBGene00045411
        NDB locus_tag CELE_C25F9.11
        NCBI gene 6418698
        RefSeq protein NM_001392698.1
        TrEMBL UniProtAcc A5JYW3
        UniProt_GCRP UniProtAcc A5JYW3
    Species: Caenorhabditis elegans
    History: Version_change: 1 03 May 2007 11:51:45 WBPerson4025 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar02123543
      WBVar02124282
      WBVar00091261
      WBVar01499709
      WBVar02124842
      WBVar02121908
      WBVar02076226
      WBVar01498456
      WBVar01499566
      WBVar02122876
      WBVar00091149
      WBVar02122706
      WBVar01597840
      WBVar01597841
      WBVar01597842
      WBVar01597843
      WBVar01597844
      WBVar01597845
      WBVar02122169
      WBVar02079473
      WBVar02121812
      WBVar01499446
      WBVar02120531
      WBVar02123481
      WBVar01498549
      WBVar02124976
      WBVar02122402
      WBVar02121484
      WBVar01499299
      WBVar01498934
      WBVar01100134
      WBVar02122044
      WBVar02124069
      WBVar01100135
      WBVar00487882
      WBVar01100136
      WBVar02123150
      WBVar01100137
      WBVar01100138
      WBVar02121326
      WBVar01498958
      WBVar02124642
    RNASeq_FPKM (74)
    Ortholog: chrV_pilon.g17894 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00005833 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007726 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00045412 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABarppaapp; ABarpppapp; g1; head mesodermal cell; and neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; RNA-seq; and microarray studies. Is affected by twenty-two chemicals including Ethanol; Nitric Oxide; and Tunicamycin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C25F9.11
    Corresponding_transcript: C25F9.11.1
    Associated_feature: WBsf653572
      WBsf020124
  Experimental_info: Expr_pattern: Expr1019905
      Expr1145232
      Expr2001089
      Expr2019310
    Drives_construct: WBCnstr00023230
    Construct_product: WBCnstr00023230
    Microarray_results: A_12_P142045
      A_12_P142046
      Aff_Y116F11.AA
      GPL14144_C25F9.11_91-150_0.951_1_A
      GPL19516_CGZ0005943
      GPL19516_CGZ0005944
      GPL21109_C25F9.11.1
      GPL21109_C25F9.11.2
    Expression_cluster (258)
  Map_info: Positive: Positive_clone: C25F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 21.8698
  Method: Gene