WormBase Tree Display for Gene: WBGene00045209
expand all nodes | collapse all nodes | view schema
| WBGene00045209 | SMap | S_parent | Sequence | F13E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F13E9.16 | |||||||
| Molecular_name | F13E9.16 | ||||||||
| F13E9.16.1 | |||||||||
| CE45439 | |||||||||
| Other_name | CELE_F13E9.16 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F13E9.16 | ||||||||
| DB_info | Database | AceView | gene | 4L650 | |||||
| WormFlux | gene | WBGene00045209 | |||||||
| NDB | locus_tag | CELE_F13E9.16 | |||||||
| NCBI | gene | 4927003 | |||||||
| RefSeq | protein | NM_001083209.4 | |||||||
| TrEMBL | UniProtAcc | A1Z6D2 | |||||||
| UniProt_GCRP | UniProtAcc | A1Z6D2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 13 Dec 2006 17:42:48 | WBPerson4025 | Event | Split_from | WBGene00008757 | ||
| Split_from | WBGene00008757 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar01499372 | |||||||||
| WBVar01499925 | |||||||||
| WBVar00940228 | |||||||||
| WBVar00940229 | |||||||||
| WBVar01688125 | |||||||||
| WBVar00434892 | |||||||||
| WBVar00434893 | |||||||||
| WBVar01500245 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g11704 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Paralog | WBGene00009017 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00016322 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; body wall muscle cell; and neurons based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-2; eat-2; and alg-1 based on RNA-seq and microarray studies. Is affected by five chemicals including multi-walled carbon nanotube; Cry5B; and Atrazine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F13E9.16 | |||||||
| Corresponding_CDS_history | F13E9.16:wp220 | ||||||||
| Corresponding_transcript | F13E9.16.1 | ||||||||
| Other_sequence | FG621213.1 | ||||||||
| FG621244.1 | |||||||||
| Associated_feature | WBsf668275 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00041690 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1148474 | ||||||||
| Expr2020741 | |||||||||
| Drives_construct | WBCnstr00023299 | ||||||||
| Construct_product | WBCnstr00023299 | ||||||||
| Microarray_results | 178555_at | ||||||||
| A_12_P111383 | |||||||||
| Aff_F13E9.8 | |||||||||
| GPL19516_CGZ0015922 | |||||||||
| GPL21109_F13E9.16 | |||||||||
| GPL3518_CE05610 | |||||||||
| GPL8673_F13E9_16P00284 | |||||||||
| GPL8673_F13E9_16P00287 | |||||||||
| Expression_cluster (47) | |||||||||
| Map_info | Positive | Positive_clone | F13E9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.73149 | |||||||
| Method | Gene |
