WormBase Tree Display for Gene: WBGene00044900
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| WBGene00044900 | SMap | S_parent | Sequence | R09B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cnc-11 | Person_evidence | WBPerson168 | |||||
| Sequence_name | R09B5.13 | ||||||||
| Molecular_name | R09B5.13 | ||||||||
| R09B5.13.1 | |||||||||
| CE40310 | |||||||||
| Other_name | CELE_R09B5.13 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cnc-11 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044900 | |||||
| NDB | locus_tag | CELE_R09B5.13 | |||||||
| NCBI | gene | 4926913 | |||||||
| RefSeq | protein | NM_001083278.3 | |||||||
| TrEMBL | UniProtAcc | A4V4W3 | |||||||
| UniProt_GCRP | UniProtAcc | A4V4W3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 09 Jun 2006 09:53:33 | WBPerson1867 | Event | Created | |||
| 2 | 09 Jun 2006 10:11:26 | WBPerson2970 | Name_change | CGC_name | cnc-11 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cnc | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004516 | ||||||||
| 00004517 | |||||||||
| 00004518 | |||||||||
| Ortholog | WBGene00045472 | Caenorhabditis briggsae | Person_evidence | WBPerson2531 | |||||
| WBPerson168 | |||||||||
| WBGene00079012 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00079005 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| Structured_description | Concise_description | cnc-11 encodes one of eleven C. elegans caenacin peptides; CNC-11 is predicted to be a secreted protein that functions as an antimicrobial peptide in the innate immune response; cnc-11 expression is upregulated in response to infection with the fungus Drechmeria coniospora and also in response to injury (needle wounding); cnc-11 expression is also modestly upregulated in response to osmotic stress; overexpression of a genomic cluster containing cnc-11, along with the five other cnc genes, is associated with increased resistance to D. coniospora infection. | Paper_evidence | WBPaper00032891 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 04 Jan 2010 00:00:00 | ||||||||
| Automated_description | Involved in defense response to fungus and innate immune response. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R09B5.13 | |||||||
| Corresponding_transcript | R09B5.13.1 | ||||||||
| Associated_feature | WBsf231406 | ||||||||
| Experimental_info | Expr_pattern | Expr1026984 | |||||||
| Expr1155269 | |||||||||
| Expr2010262 | |||||||||
| Expr2028504 | |||||||||
| Drives_construct | WBCnstr00023337 | ||||||||
| Construct_product | WBCnstr00023337 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000503906 | ||||||||
| Map_info | Map | V | Position | -18.9326 | Error | 0.002157 | |||
| Positive | Positive_clone | R09B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00032891 | ||||||||
| WBPaper00058870 | |||||||||
| WBPaper00060703 | |||||||||
| WBPaper00062289 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
