WormBase Tree Display for Gene: WBGene00044791
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| WBGene00044791 | SMap | S_parent | Sequence | F55C5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bnc-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F55C5.11 | ||||||||
| Molecular_name | F55C5.11 | ||||||||
| F55C5.11.1 | |||||||||
| CE40071 | |||||||||
| Other_name | CELE_F55C5.11 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | bnc-1 | ||||||||
| DB_info | Database | AceView | gene | 5M756 | |||||
| WormFlux | gene | WBGene00044791 | |||||||
| NDB | locus_tag | CELE_F55C5.11 | |||||||
| NCBI | gene | 4363106 | |||||||
| RefSeq | protein | NM_001047660.4 | |||||||
| SwissProt | UniProtAcc | Q1ZXU0 | |||||||
| UniProt_GCRP | UniProtAcc | Q1ZXU0 | |||||||
| OMIM | gene | 601930 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 17 Mar 2006 11:22:36 | WBPerson4025 | Event | Created | |||
| 2 | 25 Mar 2014 09:31:06 | WBPerson2970 | Name_change | CGC_name | bnc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bnc | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00029773 | ||||||||
| WBStrain00029774 | |||||||||
| WBStrain00029778 | |||||||||
| WBStrain00029905 | |||||||||
| WBStrain00050481 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00066768 | ||||||||
| 00066769 | |||||||||
| 00066770 | |||||||||
| 00066771 | |||||||||
| 00066772 | |||||||||
| 00066773 | |||||||||
| 00066774 | |||||||||
| 00066775 | |||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity. Involved in cell fate specification and negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Expressed in cholinergic neurons and in male. Human ortholog(s) of this gene implicated in primary ovarian insufficiency 16. Is an ortholog of human BNC1 (basonuclin zinc finger protein 1) and BNC2 (basonuclin zinc finger protein 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080873 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1081) | ||||
| Molecular_info | Corresponding_CDS | F55C5.11 | |||||||
| Corresponding_transcript | F55C5.11.1 | ||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf1001549 | ||||||||
| WBsf1001550 | |||||||||
| WBsf1020549 | |||||||||
| WBsf1020550 | |||||||||
| WBsf234655 | |||||||||
| Experimental_info | Expr_pattern | Expr13235 | |||||||
| Expr13469 | |||||||||
| Expr13479 | |||||||||
| Expr1024407 | |||||||||
| Expr1152260 | |||||||||
| Expr2009642 | |||||||||
| Expr2027881 | |||||||||
| Drives_construct | WBCnstr00023351 | ||||||||
| WBCnstr00038793 | |||||||||
| Construct_product | WBCnstr00023351 | ||||||||
| WBCnstr00038772 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (54) | |||||||||
| Map_info | Map | V | Position | 3.979 | |||||
| Positive | Positive_clone | F55C5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048262 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056064 | |||||||||
| WBPaper00059400 | |||||||||
| WBPaper00061738 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
