WormBase Tree Display for Gene: WBGene00044743
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WBGene00044743 | SMap | S_parent | Sequence | C35B8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | crb-3 | Paper_evidence | WBPaper00046449 | |||
Person_evidence | WBPerson805 | ||||||
Sequence_name | C35B8.4 | ||||||
Molecular_name | C35B8.4 | ||||||
C35B8.4.1 | |||||||
CE39685 | |||||||
C35B8.4.2 | |||||||
Other_name | CELE_C35B8.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | crb-3 | ||||||
DB_info | Database | AceView | gene | C35B8.4 | |||
WormFlux | gene | WBGene00044743 | |||||
NDB | locus_tag | CELE_C35B8.4 | |||||
NCBI | gene | 4363125 | |||||
RefSeq | protein | NM_001047759.6 | |||||
TREEFAM | TREEFAM_ID | TF338371 | |||||
TrEMBL | UniProtAcc | A0FLQ5 | |||||
UniProt_GCRP | UniProtAcc | A0FLQ5 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | crb | ||||||
Allele (151) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00004218 | ||||||
Ortholog (28) | |||||||
Structured_description | Concise_description | crb-3 encodes a transmembrane protein related to Drosophila Crumbs and human CRB3; similar to human CRB3, CRB-3 lacks the extensive extracellular domain found in Drosophila Crumbs, as well as in the C. elegans Crumbs family members CRB-1 and EAT-20; CRB-3 shows apical localization in the intestine and pharynx. | Paper_evidence | WBPaper00046449 | |||
Person_evidence | WBPerson805 | ||||||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 13 Jul 2015 00:00:00 | ||||||
Automated_description | Predicted to be located in membrane. Expressed in several structures, including excretory canal; intestinal cell; rectal epithelium; somatic nervous system; and uterus. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C35B8.4 | |||||
Corresponding_transcript | C35B8.4.1 | ||||||
C35B8.4.2 | |||||||
Other_sequence (12) | |||||||
Associated_feature | WBsf717355 | ||||||
WBsf718667 | |||||||
WBsf1006369 | |||||||
WBsf1006370 | |||||||
WBsf1006371 | |||||||
WBsf1023523 | |||||||
Experimental_info | Expr_pattern | Expr12243 | |||||
Expr12244 | |||||||
Expr1019621 | |||||||
Expr1040316 | |||||||
Expr1145974 | |||||||
Expr2010526 | |||||||
Expr2028766 | |||||||
Drives_construct | WBCnstr00023374 | ||||||
Construct_product | WBCnstr00020201 | ||||||
WBCnstr00023374 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (113) | |||||||
Interaction | WBInteraction000578902 | ||||||
Map_info | Map | X | Position | 0.809583 | |||
Positive | Positive_clone | C35B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00046449 | ||||||
WBPaper00062554 | |||||||
Remark | [060213 pad] Gene ID appears to have been assigned to multiple CDSs on Multipe clones. (Y55F3BR..?..2006-02-03) (Y62E10A..Y62E10A.20..2006-02-06) (JC8..JC8.14..2006-02-07) (C35B8..C35B8.4..2006-02-08). All genes have now been assigned a unique geneID. | ||||||
Y55F3BR.11 = WBGene00044757; JC8.14 = WBGene00044737; C35B8.4 = WBGene00044743; Y62E10A.20 = WBGene00044745 | Curator_confirmed | WBPerson2970 | |||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |