WormBase Tree Display for Gene: WBGene00044620
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| WBGene00044620 | SMap | S_parent | Sequence | T22B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bus-4 | Paper_evidence | WBPaper00037686 | |||||
| Person_evidence | WBPerson261 | ||||||||
| Sequence_name | T22B11.2 | ||||||||
| Molecular_name | T22B11.2 | ||||||||
| T22B11.2.1 | |||||||||
| CE46509 | |||||||||
| Other_name | CELE_T22B11.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | bus-4 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 01 Sep 2005 10:24:02 | WBPerson2970 | Event | Created | |||
| 2 | 16 Nov 2010 11:42:37 | WBPerson2970 | Event | Acquires_merge | WBGene00020676 | ||||
| Acquires_merge | WBGene00020676 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bus | ||||||||
| Reference_allele | WBVar00144924 | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00004646 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032876 | ||||||||
| 00032877 | |||||||||
| 00146092 | |||||||||
| 00146093 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | bus-4 encodes a galactosyltransferase; bus-4 is required for bacterial infection, and for fully normal cuticle integrity and body size; specifically, bus-4 is needed both for colonization by Microbacterium nematophilum (and the tail-swelling response to M. nematophilum infection) and for attachment of Yersinia pseudotuberculosis biofilms. | Paper_evidence | WBPaper00026735 | |||||
| WBPaper00029153 | |||||||||
| WBPaper00037686 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 19 Nov 2010 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be located in membrane. Expressed in intestine; pharynx; and seam cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22B11.2 | |||||||
| Corresponding_CDS_history | T22B11.2:wp227 | ||||||||
| Corresponding_transcript | T22B11.2.1 | ||||||||
| Other_sequence | CSC00611_1 | ||||||||
| FK803349.1 | |||||||||
| FD514461.1 | |||||||||
| Associated_feature | WBsf660135 | ||||||||
| WBsf996372 | |||||||||
| WBsf996373 | |||||||||
| WBsf1017300 | |||||||||
| WBsf228232 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00035782 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070560 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018995 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103538 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053778 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070562 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070563 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070561 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9275 | ||||||||
| Expr1040290 | |||||||||
| Expr1157329 | |||||||||
| Expr2009689 | |||||||||
| Expr2027928 | |||||||||
| Drives_construct | WBCnstr00007658 | ||||||||
| WBCnstr00007659 | |||||||||
| WBCnstr00023434 | |||||||||
| Construct_product | WBCnstr00007658 | ||||||||
| WBCnstr00007659 | |||||||||
| WBCnstr00023434 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (203) | |||||||||
| Interaction | WBInteraction000007898 | ||||||||
| WBProcess | WBbiopr:00000039 | ||||||||
| Map_info | Map | IV | Position | 0.679726 | Error | 0.00846 | |||
| Positive | Positive_clone | T22B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5460 | |||||||
| Reference (16) | |||||||||
| Method | Gene |
