WormBase Tree Display for Gene: WBGene00044469
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| WBGene00044469 | SMap | S_parent | Sequence | T26C12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-173 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | T26C12.6 | ||||||||
| Molecular_name | T26C12.6 | ||||||||
| T26C12.6.1 | |||||||||
| CE38875 | |||||||||
| Other_name | CELE_T26C12.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | clec-173 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044469 | |||||
| NDB | locus_tag | CELE_T26C12.6 | |||||||
| NCBI | gene | 3896782 | |||||||
| RefSeq | protein | NM_001038345.3 | |||||||
| TrEMBL | UniProtAcc | Q4R111 | |||||||
| UniProt_GCRP | UniProtAcc | Q4R111 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 10 Jun 2005 12:18:04 | WBPerson1867 | Event | Created | |||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-173 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele | WBVar01580635 | ||||||||
| WBVar01580636 | |||||||||
| WBVar01580637 | |||||||||
| WBVar01580638 | |||||||||
| WBVar01580639 | |||||||||
| WBVar02151441 | |||||||||
| WBVar02122462 | |||||||||
| WBVar02133567 | |||||||||
| WBVar00571006 | |||||||||
| WBVar00571008 | |||||||||
| WBVar00571009 | |||||||||
| WBVar01498316 | |||||||||
| WBVar01499789 | |||||||||
| WBVar01499440 | |||||||||
| WBVar01997154 | |||||||||
| WBVar01499633 | |||||||||
| WBVar02122586 | |||||||||
| WBVar02122587 | |||||||||
| WBVar00186983 | |||||||||
| WBVar00186984 | |||||||||
| WBVar00186985 | |||||||||
| WBVar00270402 | |||||||||
| WBVar00270403 | |||||||||
| WBVar01965767 | |||||||||
| WBVar01965768 | |||||||||
| WBVar01965769 | |||||||||
| WBVar00897609 | |||||||||
| WBVar00420918 | |||||||||
| WBVar00420919 | |||||||||
| WBVar00897610 | |||||||||
| WBVar00420920 | |||||||||
| WBVar01514470 | |||||||||
| WBVar00897611 | |||||||||
| WBVar00897612 | |||||||||
| WBVar00897613 | |||||||||
| WBVar00897614 | |||||||||
| WBVar00897615 | |||||||||
| WBVar00897616 | |||||||||
| WBVar00897617 | |||||||||
| WBVar00897618 | |||||||||
| WBVar01580631 | |||||||||
| WBVar00897619 | |||||||||
| WBVar00897620 | |||||||||
| WBVar01580632 | |||||||||
| WBVar00897621 | |||||||||
| WBVar01580633 | |||||||||
| WBVar01580634 | |||||||||
| WBVar00897622 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00028120 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||
| WBGene00126708 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00271793 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | ||||||
| CBOVI.g11167 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP21.g9529 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
| CSP26.g12394 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP31.g19741 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP38.g4142 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP40.g4190 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cang_2012_03_13_00447.g10960 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_IV.g13663 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold630.g21050 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00157.g5870 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_013787 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Sp34_40039600 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g9931 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00127300 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| WBGene00214395 | Caenorhabditis japonica | From_analysis | WormBase-Compara | ||||||
| WBGene00067104 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq; microarray; and proteomic studies. Is affected by fifteen chemicals including Tunicamycin; mianserin; and Cry5B based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; Lectin C-type domain; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T26C12.6 | |||||||
| Corresponding_transcript | T26C12.6.1 | ||||||||
| Other_sequence | CBC02230_1 | ||||||||
| Associated_feature | WBsf667823 | ||||||||
| Experimental_info | Expr_pattern | Expr1018444 | |||||||
| Expr1157735 | |||||||||
| Expr2010095 | |||||||||
| Expr2028337 | |||||||||
| Drives_construct | WBCnstr00023536 | ||||||||
| Construct_product | WBCnstr00023536 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (196) | |||||||||
| Map_info | Map | IV | Position | -4.94773 | Error | 0.072396 | |||
| Positive | Positive_clone | T26C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
