WormBase Tree Display for Gene: WBGene00044324
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| WBGene00044324 | SMap | S_parent | Sequence | ZK652 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ufm-1 | Paper_evidence | WBPaper00042074 | |||||
| Person_evidence | WBPerson1352 | ||||||||
| Sequence_name | ZK652.3 | ||||||||
| Molecular_name | ZK652.3 | ||||||||
| ZK652.3.1 | |||||||||
| CE00449 | |||||||||
| Other_name | tag-277 | ||||||||
| 3H949 | Paper_evidence | ||||||||
| Accession_evidence | EMBL | AF303260 | |||||||
| CELE_ZK652.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | ufm-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 22 Apr 2005 11:55:18 | WBPerson2970 | Event | Created | |||
| 2 | 24 Jul 2006 13:03:18 | WBPerson2970 | Event | Acquires_merge | WBGene00022784 | ||||
| 3 | 15 Mar 2013 16:30:53 | WBPerson2970 | Name_change | CGC_name | ufm-1 | ||||
| Other_name | tag-277 | ||||||||
| Acquires_merge | WBGene00022784 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ufm | ||||||||
| Allele (15) | |||||||||
| Strain | WBStrain00003130 | ||||||||
| WBStrain00036176 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00043824 | ||||||||
| 00043825 | |||||||||
| 00146031 | |||||||||
| Contained_in_operon | CEOP3460 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Concise_description | ufm-1 encodes a conserved ubiquitin-like post-translational modifier. | Paper_evidence | WBPaper00005435 | |||||
| WBPaper00044965 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 02 May 2014 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in protein ufmylation. Predicted to be located in cytoplasm and nucleus. Expressed in egg-laying apparatus; hermaphrodite gonad; intestine; and seam cell. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 14. Is an ortholog of human UFM1 (ubiquitin fold modifier 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080296 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:20597) | ||||
| Molecular_info | Corresponding_CDS | ZK652.3 | |||||||
| Corresponding_transcript | ZK652.3.1 | ||||||||
| Other_sequence (80) | |||||||||
| Associated_feature | WBsf645363 | ||||||||
| WBsf225286 | |||||||||
| WBsf225287 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram1949 | ||||||||
| Expr7240 | |||||||||
| Expr10622 | |||||||||
| Expr1021446 | |||||||||
| Expr1040227 | |||||||||
| Expr1163022 | |||||||||
| Expr2017751 | |||||||||
| Expr2035890 | |||||||||
| Drives_construct | WBCnstr00003613 | ||||||||
| WBCnstr00003614 | |||||||||
| WBCnstr00017401 | |||||||||
| WBCnstr00037812 | |||||||||
| Construct_product | WBCnstr00037812 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (22) | |||||||||
| Map_info | Map | III | Position | -0.542001 | Error | 0.000839 | |||
| Positive | Positive_clone | ZK652 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005435 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00044965 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
