WormBase Tree Display for Gene: WBGene00044315

WBGene00044315 SMap: S_parent: Sequence: F41G3
  Identity: Version: 1
    Name: Sequence_name: F41G3.20
      Molecular_name: F41G3.20
        F41G3.20.1
        CE47953
      Other_name: CELE_F41G3.20 Accession_evidence: NDB BX284602
      Public_name: F41G3.20
    DB_info: Database: AceView gene 2H42
        WormFlux gene WBGene00044315
        NDB locus_tag CELE_F41G3.20
        Panther gene CAEEL|WormBase=WBGene00044315|UniProtKB=Q4TTB5
          family PTHR46219
        NCBI gene 3565874
        RefSeq protein NM_001026986.4
        TREEFAM TREEFAM_ID TF318899
        TrEMBL UniProtAcc Q4TTB5
        UniProt_GCRP UniProtAcc Q4TTB5
    Species: Caenorhabditis elegans
    History: Version_change: 1 21 Apr 2005 09:49:03 WBPerson1867 Event: Created
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (18)
    RNASeq_FPKM (74)
    Ortholog (28)
    Paralog (61)
    Structured_description: Automated_description: Is affected by several genes including daf-2; daf-18; and isp-1 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including resveratrol; Hydrolyzable Tannins; and Humic Substances based on microarray studies. Is predicted to encode a protein with the following domains: ShK domain-like; CC domain; and ShKT domain. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F41G3.20
    Corresponding_CDS_history: F41G3.20:wp228
      F41G3.20:wp234
    Corresponding_transcript: F41G3.20.1
    Other_sequence: Dviv_isotig15407
      DVC01677_1
      CJC09220_1
      OOC00621_1
      Oden_isotig18018
      Acan_isotig22919
      EV851478.1
      Dviv_isotig19279
      Dviv_isotig15408
  Experimental_info: RNAi_result: WBRNAi00014766 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1020081
      Expr1150890
    Drives_construct: WBCnstr00023635
    Construct_product: WBCnstr00023635
    Microarray_results (14)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00053888:drh-3(rrr2)_downregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00060434:pH4.33_vs_pH6.33_uprgulated
      WBPaper00061952:daf-18(nr2037)_downregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00065841:41_0
      WBPaper00065841:41_1
      WBPaper00065841:41_2
      WBPaper00065993:glp-1(e2141)_upregulated
      cgc4489_group_18
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00032062:age_regulated_genes
      WBPaper00034739:N2moreDR1350
      WBPaper00035227:heat_shock_regulated
      WBPaper00035873:osm-7_regulated
      WBPaper00035873:osm-11_regulated
      WBPaper00038060:SUMO-1_upregulated
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00038462:aging_downregulated
      WBPaper00039851:HK_C_albicans_vs_HK_OP50
      WBPaper00039851:Live_C_albicans_vs_HK_OP50
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:TA200_down
      WBPaper00040963:TA300_down
      WBPaper00041002:HF_3d_0.2mM_Down
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041002:HQ_3d_2.0mM_Up
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045865:biofilm_upregulated_A
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:N2_allantoin_downregulated
      WBPaper00055435:MUA-AuNP-3_downregulated
      WBPaper00055899:2,4-Dinitroanisole_regulated
      WBPaper00055899:nitroguanidine_regulated
  Map_info: Positive: Positive_clone: F41G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.0694782
  Reference: WBPaper00046507
    WBPaper00061876
  Method: Gene